RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	ZNF660	Q6AZW8	331 aa	Predicted RBP	6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	HIST2H3A	Q71DI3	136 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	CCDC28A	Q8IWP9	274 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	TMEM86B	Q8N661	226 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	GIMAP1	Q8WWP7	306 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	ARL6	Q9H0F7	186 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	LPAR5	Q9H1C0	372 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	UNC79	Q9P2D8	2635 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	OVOL3	O00110	214 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	RRH	O14718	337 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	OR7C2	O60412	319 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	CA2	P00918	260 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	S100A4	P26447	101 aa	Known RBP	6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	CHAT	P28329	748 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	ZNF137P	P52743	207 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	ZNF645	Q8N7E2	425 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	SRSF12	Q8WXF0	261 aa	Known RBP	6.92	□□□□□ -1.3
HCG18-238	ENST00000449544	BCL7B	Q9BQE9	202 aa		6.92	□□□□□ -1.3
HCG18-238	ENST00000449544		F5H0A9	414 aa	Predicted RBP	6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	LYRM1	O43325	122 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	OR9G9	P0C7N8	305 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	IGFBP2	P18065	325 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	ELK1	P19419	428 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	OTX1	P32242	354 aa	Predicted RBP	6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	HILS1	P60008	231 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	FAM219A	Q8IW50	185 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	LAX1	Q8IWV1	398 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	OR11H1	Q8NG94	326 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	RGP1	Q92546	391 aa	Predicted RBP	6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	MRGPRF	Q96AM1	343 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	RNF167	Q9H6Y7	350 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	DOK5	Q9P104	306 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	UFC1	Q9Y3C8	167 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	C3orf85	A0A1B0GTC6	90 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	C5orf63	A6NC05	138 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	HNRNPC	P07910	306 aa	Known RBP eCLIP	6.91	□□□□□ -1.3	3e-7	■■□□□ 14.5
HCG18-238	ENST00000449544	CLINT1	Q14677	625 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	LURAP1L	Q8IV03	231 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	OR5H6	Q8NGV6	325 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	LSM10	Q969L4	123 aa	Known RBP	6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	DAZAP1	Q96EP5	407 aa	Known RBP	6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	C20orf85	Q9H1P6	137 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	OR51J1	Q9H342	316 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	PPP1R3E	Q9H7J1	279 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	PSENEN	Q9NZ42	101 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	IGHV3OR16-8	A0A075B7F1	116 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544		J3KRW8	73 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	IGKV3-20	P01619	116 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	RPL19	P84098	196 aa	Known RBP	6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	C5orf64	Q2M2E5	130 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	AKIRIN2	Q53H80	203 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	TEX36	Q5VZQ5	186 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	TREML4	Q6UXN2	200 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	TBC1D26	Q86UD7	250 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	NOL4L	Q96MY1	436 aa	Predicted RBP	6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	C21orf62	Q9NYP8	219 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	HSF4	Q9ULV5	492 aa		6.91	□□□□□ -1.3
HCG18-238	ENST00000449544	SAA2-SAA4	A0A096LPE2	208 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	YPEL1	O60688	119 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	SAA2	P0DJI9	122 aa	Predicted RBP	6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	SCAND1	P57086	179 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	KLF9	Q13886	244 aa	Predicted RBP	6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	HERPUD1	Q15011	391 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	MST1L	Q2TV78	715 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	CNPY1	Q3B7I2	92 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	DUX4L9	Q6RFH8	374 aa	Predicted RBP	6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	STH	Q8IWL8	128 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	VKORC1L1	Q8N0U8	176 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	SEC22A	Q96IW7	307 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	C16orf92	Q96LL3	132 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	YPEL2	Q96QA6	119 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	PNRC2	Q9NPJ4	139 aa	Known RBP	6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	CTSZ	Q9UBR2	303 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	COL4A2	P08572	1712 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	CFAP54	Q96N23	3096 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	SSSCA1	O60232	199 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	RP2	O75695	350 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	EXOSC2	Q13868	293 aa	Known RBP	6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	HABP2	Q14520	560 aa	Predicted RBP	6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	HYLS1	Q96M11	299 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	TMEM140	Q9NV12	185 aa		6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	FLNA	P21333	2647 aa	Known RBP	6.9	□□□□□ -1.3
HCG18-238	ENST00000449544	HELT	A6NFD8	242 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544		F6UZH7	168 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	CT45A10	P0DMU9	189 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	NPY1R	P25929	384 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	FGF9	P31371	208 aa	Predicted RBP	6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	TAS2R45	P59539	299 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	MORN2	Q502X0	79 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	OR1B1	Q8NGR6	318 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	DYNC2LI1	Q8TCX1	351 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	BORCS7	Q96B45	105 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	RBMXL1	Q96E39	390 aa	Known RBP	6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	TRAV24	A0A0B4J272	114 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	TRBV5-5	A0A0J9YX44	114 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544		A0A1B0GV50	99 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544		A0A1W2PPR1	153 aa		6.9	□□□□□ -1.31
HCG18-238	ENST00000449544	CX3CL1	P78423	397 aa		6.9	□□□□□ -1.31

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