RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZNF580Q9UK33 172 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 TSSC4Q9Y5U2 329 aaPredicted RBP11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 TRAV41A0A0B4J266 112 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 RBFOX2O43251 390 aaKnown RBP eCLIP11.03□□□□□ -0.647e-6■□□□□ 8.8
GTF3C3-206ENST00000448539 ACTL6BO94805 426 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 RLN1P04808 185 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 SAA1P0DJI8 122 aaPredicted RBP11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 CD83Q01151 205 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 FXYD3Q14802 87 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 ECSCRQ19T08 205 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 PHLDA2Q53GA4 152 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 PRR31Q5SQ13 230 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 HIST2H2BDQ6DRA6 164 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 CCDC190Q86UF4 302 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 Q8N402 240 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 OR4D10Q8NGI6 311 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 OR6Q1Q8NGQ2 317 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 TERB2Q8NHR7 220 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 WSB1Q9Y6I7 421 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 V9GYH0 126 aa11.03□□□□□ -0.64
GTF3C3-206ENST00000448539 ANKRD20A5PA0PJZ0 165 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 HPRT1P00492 218 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 CRYGBP07316 175 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 FAUP35544 74 aaKnown RBP11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 ECI1P42126 302 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 PPP5CP53041 499 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 AP3S2P59780 193 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 CXorf66Q5JRM2 361 aaPredicted RBP11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 TMEM65Q6PI78 240 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 IDO2Q6ZQW0 420 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 LHFPL1Q86WI0 220 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 GRPEL2Q8TAA5 225 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 ZFAND1Q8TCF1 268 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 ARPC1AQ92747 370 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 ZNF486Q96H40 463 aaPredicted RBP11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 RSRP1Q9BUV0 290 aa11.02□□□□□ -0.65
GTF3C3-206ENST00000448539 G3V318 75 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 RAMP3O60896 148 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 OR2A4O95047 310 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 ELANEP08246 267 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 F2RP25116 425 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 ETV6P41212 452 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 BRWD1-AS2P59051 145 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 TAS2R31P59538 309 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 ERVK-16P61578 105 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 NDPQ00604 133 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 PJVKQ0ZLH3 352 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 FOXE3Q13461 319 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 TNXAQ16473 311 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 PRSS8Q16651 343 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 TCTEX1D4Q5JR98 221 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 FAAP20Q6NZ36 180 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 UNQ5815/PRO19632Q6UWF5 114 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 SSX9Q7RTT3 188 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 VKORC1L1Q8N0U8 176 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 TOMM5Q8N4H5 51 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 TCTEX1D1Q8N7M0 179 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 OR4C16Q8NGL9 310 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 RHOVQ96L33 236 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 OR2A7Q96R45 310 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 OR4F4Q96R69 305 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 PRRT1Q99946 306 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 FAM103A1Q9BTL3 118 aaKnown RBP11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 PLEKHA2Q9HB19 425 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 ZFP57Q9NU63 452 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 MCUBQ9NWR8 336 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 SCP2D1Q9UJQ7 156 aa11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 TET2Q6N021 2002 aaPredicted RBP11.01□□□□□ -0.65
GTF3C3-206ENST00000448539 A0A1W2PN81 502 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 NUDT19A8MXV4 375 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 IGHG4P01861 327 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 NQO2P16083 231 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 CD40LGP29965 261 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 CHRNA7P36544 502 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 INPP1P49441 399 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 CRIP2P52943 208 aaPredicted RBP11□□□□□ -0.65
GTF3C3-206ENST00000448539 CFHR3Q02985 330 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 ZNF79Q15937 498 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 TREML4Q6UXN2 200 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 TBC1D26Q86UD7 250 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 CCDC71LQ8N9Z2 235 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 LFNGQ8NES3 379 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 DMBX1Q8NFW5 382 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 FAM110DQ8TAY7 271 aaPredicted RBP11□□□□□ -0.65
GTF3C3-206ENST00000448539 R3HDM4Q96D70 268 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 PHB2Q99623 299 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 HRASLSQ9HDD0 168 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 SLC2A9Q9NRM0 540 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 COPZ2Q9P299 210 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 C14orf166Q9Y224 244 aaKnown RBP11□□□□□ -0.65
GTF3C3-206ENST00000448539 FOXA2Q9Y261 457 aaPredicted RBP11□□□□□ -0.65
GTF3C3-206ENST00000448539 FBXO7Q9Y3I1 522 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 MEGF8Q7Z7M0 2845 aa11□□□□□ -0.65
GTF3C3-206ENST00000448539 A6NHS1 94 aa10.99□□□□□ -0.65
GTF3C3-206ENST00000448539 ARPC1BO15143 372 aaKnown RBP10.99□□□□□ -0.65
GTF3C3-206ENST00000448539 MPPED1O15442 326 aa10.99□□□□□ -0.65
GTF3C3-206ENST00000448539 KBTBD11O94819 623 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms