RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TMEM230Q96A57 120 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 S1PR3Q99500 378 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 PALMDQ9NP74 551 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 GAB2Q9UQC2 676 aa10.84□□□□□ -0.67
PDLIM2-213ENST00000448520 FAM240BA0A1B0GVZ2 78 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 SH2D7A6NKC9 451 aaPredicted RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 GPR31O00270 319 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 ARPC1BO15143 372 aaKnown RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 FGF16O43320 207 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 PGLYRP1O75594 196 aaPredicted RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 GAPDHP04406 335 aaKnown RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 TCRBP04435 133 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 RLN1P04808 185 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 CTSDP07339 412 aaPredicted RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 DUTP33316 252 aaKnown RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 THBS3P49746 956 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 PIGPP57054 158 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 DEFA1P59665 94 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 DEFA3P59666 94 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 RBMS2Q15434 407 aaKnown RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 MRPL41Q8IXM3 137 aaKnown RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 OR8H3Q8N146 312 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 COMMD1Q8N668 190 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 BVESQ8NE79 360 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 OR51H1Q8NH63 302 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 ENKURQ8TC29 256 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 SLC2A9Q9NRM0 540 aa10.83□□□□□ -0.68
PDLIM2-213ENST00000448520 SNRNP70P08621 437 aaKnown RBP10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 ANXA7P20073 488 aaKnown RBP10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 MYCNOSP40205 109 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 RAB25P57735 213 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 RPL23AP62750 156 aaKnown RBP10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 SLC35B1P78383 322 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 CD69Q07108 199 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 HES1Q14469 280 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 ZNF329Q86UD4 541 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 TBC1D26Q86UD7 250 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 ZFAND1Q8TCF1 268 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 TCTEX1D2Q8WW35 142 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 C20orf85Q9H1P6 137 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 NUDT15Q9NV35 164 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 C14orf166Q9Y224 244 aaKnown RBP10.82□□□□□ -0.68
PDLIM2-213ENST00000448520 H0YJW9 148 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 TMEM11P17152 192 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 AKR1C4P17516 323 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 HOXD3P31249 432 aaPredicted RBP10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 BRWD1-AS2P59051 145 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 SURF2Q15527 256 aaPredicted RBP10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 SP6Q3SY56 376 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 FAM71F2Q6NXP2 309 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 LPCAT3Q6P1A2 487 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 KCTD9Q7L273 389 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 FOXRED2Q8IWF2 684 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 C5orf56Q8N8D9 126 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 DDB2Q92466 427 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 RITA1Q96K30 269 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 SLC25A21Q9BQT8 299 aaPredicted RBP10.81□□□□□ -0.68
PDLIM2-213ENST00000448520 NUDT19A8MXV4 375 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 MPPED1O15442 326 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 RAMP3O60896 148 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 SLC22A5O76082 557 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 IGHG2P01859 326 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 ECI1P42126 302 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 RND3P61587 244 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 HNF4GQ14541 408 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 MSMO1Q15800 293 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 ETV3LQ6ZN32 361 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 CMTM1Q8IZ96 169 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 CENPSQ8N2Z9 138 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 ZBTB34Q8NCN2 500 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 WWC2-AS2Q96NR7 200 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 TP53RKQ96S44 253 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 HSD17B10Q99714 261 aaKnown RBP10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 GHITMQ9H3K2 345 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 SLC35D1Q9NTN3 355 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 COPZ2Q9P299 210 aa10.8□□□□□ -0.68
PDLIM2-213ENST00000448520 NBEAL2Q6ZNJ1 2754 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 TEX13DA0A0J9YY54 714 aaPredicted RBP10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 H7C2Y5 167 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 FCGR3BO75015 233 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 IGKV1D-33P01593 117 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 IGKV1-33P01594 117 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 H2AFB2P0C5Z0 115 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 CNTFRP26992 372 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 SUPT4H1P63272 117 aaKnown RBP10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 EBI3Q14213 229 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 C11orf87Q6NUJ2 197 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 TEX38Q6PEX7 206 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 ZNF66Q6ZN08 573 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 SLC35E3Q7Z769 313 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 OR5AN1Q8NGI8 311 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 ZNF486Q96H40 463 aaPredicted RBP10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 NOL4LQ96MY1 436 aaPredicted RBP10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 P2RX4Q99571 388 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 GON7Q9BXV9 100 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 COL7A1Q02388 2944 aa10.79□□□□□ -0.68
PDLIM2-213ENST00000448520 CRYM-AS1A6NIL9 109 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms