RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 TMEM127O75204 238 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 NFYAP23511 347 aaPredicted RBP8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 DUTP33316 252 aaKnown RBP8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 SLC25A42Q86VD7 318 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 NR2C2APQ86WQ0 139 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 CROCCP3Q8IVE0 287 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 OR4S2Q8NH73 311 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 NUDCD2Q8WVJ2 157 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 USMG5Q96IX5 58 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 RHOVQ96L33 236 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 HSD17B10Q99714 261 aaKnown RBP8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 SPIN2AQ99865 258 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 SPIN2BQ9BPZ2 258 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 AIFM2Q9BRQ8 373 aa8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 PRKDCP78527 4128 aaKnown RBP8.48□□□□□ -1.05
NPIPB3-202ENST00000448012 TRAV18A0A075B6X5 111 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 MSGN1A6NI15 193 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 IGLV2-23P01705 113 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 OR9G9P0C7N8 305 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 CBX5P45973 191 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 PJVKQ0ZLH3 352 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 CTF1Q16619 201 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 PRSS8Q16651 343 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 ASPHD1Q5U4P2 390 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 C11orf87Q6NUJ2 197 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 ACSM6Q6P461 480 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 MMD2Q8IY49 270 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 TCTEX1D2Q8WW35 142 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 BORCS5Q969J3 196 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 WWC2-AS2Q96NR7 200 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 ANXA10Q9UJ72 324 aa8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 RBMX2Q9Y388 322 aaKnown RBP8.47□□□□□ -1.05
NPIPB3-202ENST00000448012 IGKV1D-8A0A087WSZ0 117 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 ANKRD34BA5PLL1 514 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 AIREO43918 545 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 HRASP01112 189 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 HLA-DQB1P01920 261 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 KIR2DS2P43631 304 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 SPCS2Q15005 226 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 CDK10Q15131 360 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 RPEL1Q2QD12 228 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 OR2B11Q5JQS5 317 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 FAM209BQ5JX69 171 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 IDO2Q6ZQW0 420 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 BEST4Q8NFU0 473 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 SRSF12Q8WXF0 261 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 S100A16Q96FQ6 103 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 TINAGL1Q9GZM7 467 aaPredicted RBP8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 IFT46Q9NQC8 304 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 PEF1Q9UBV8 284 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 ELF5Q9UKW6 265 aaPredicted RBP8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 SPATA2Q9UM82 520 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 LSM4Q9Y4Z0 139 aaKnown RBP8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 U3KQK5 164 aa8.46□□□□□ -1.06
NPIPB3-202ENST00000448012 FAM223BA6NKX1 122 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 LINC00473A8K010 186 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 BRI3O95415 125 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 DHFRP00374 187 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 CRYGBP07316 175 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 CLEC2LP0C7M8 214 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 SAA1P0DJI8 122 aaPredicted RBP8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 GP9P14770 177 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 SPNP16150 400 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 HERV-K104P61576 105 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 ATP5G2Q06055 141 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 CATR1Q13166 79 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 ZNF66Q6ZN08 573 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 FAM223AQ8IWN6 122 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 ZBTB34Q8NCN2 500 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 SECTM1Q8WVN6 248 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 DDB2Q92466 427 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 SNAPC3Q92966 411 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 TAS2R8Q9NYW2 309 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 PEMTQ9UBM1 199 aa8.45□□□□□ -1.06
NPIPB3-202ENST00000448012 SRRM4A7MD48 611 aaKnown RBP8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 H0Y980 276 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 OR2A4O95047 310 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 APELAP0DMC3 54 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 ZNF182P17025 639 aaPredicted RBP8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 FCGR2CP31995 323 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 NCS1P62166 190 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 MSMO1Q15800 293 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 OVCH2Q7RTZ1 564 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 HOGA1Q86XE5 327 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 SGPP2Q8IWX5 399 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 MFSD4AQ8N468 514 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 C5orf30Q96GV9 206 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 OR2A7Q96R45 310 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 ASCL2Q99929 193 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 SLC5A7Q9GZV3 580 aa8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 ZNF430Q9H8G1 570 aaPredicted RBP8.44□□□□□ -1.06
NPIPB3-202ENST00000448012 CYB5BO43169 146 aa8.43□□□□□ -1.06
NPIPB3-202ENST00000448012 SSX5O60225 188 aa8.43□□□□□ -1.06
NPIPB3-202ENST00000448012 MAS1LP35410 378 aa8.43□□□□□ -1.06
NPIPB3-202ENST00000448012 RPL27AP46776 148 aaKnown RBP8.43□□□□□ -1.06
NPIPB3-202ENST00000448012 SYNJ2BPP57105 145 aa8.43□□□□□ -1.06
NPIPB3-202ENST00000448012 FXYD4P59646 89 aa8.43□□□□□ -1.06
NPIPB3-202ENST00000448012 VBP1P61758 197 aa8.43□□□□□ -1.06
NPIPB3-202ENST00000448012 LSM3P62310 102 aaKnown RBP8.43□□□□□ -1.06
NPIPB3-202ENST00000448012 RHOGP84095 191 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms