RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 PITX3O75364 302 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 GAPDHP04406 335 aaKnown RBP20.07■□□□□ 0.8
RFFL-206ENST00000447669 CXCL2P19875 107 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 AP2S1P53680 142 aaPredicted RBP20.07■□□□□ 0.8
RFFL-206ENST00000447669 SMCO1Q147U7 214 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 FAM71E2Q8N5Q1 922 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 HSPB11Q9Y547 144 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 CREBBPQ92793 2442 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 CSPG4Q6UVK1 2322 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 A0A1W2PPI3 338 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 LEUTXA8MZ59 168 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 APOA2P02652 100 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 NQO2P16083 231 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 OR2B8PP59922 312 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 FGL1Q08830 312 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 MIDNQ504T8 468 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 FBLN7Q53RD9 439 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 ZNF546Q86UE3 836 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 PIP4P2Q8N4L2 257 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 THAP6Q8TBB0 222 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 RHOVQ96L33 236 aa20.07■□□□□ 0.8
RFFL-206ENST00000447669 A0A1B0GU03 582 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 UBE2E1P51965 193 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 PRSS57Q6UWY2 283 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 LINC01356Q8N9X3 169 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 SPIN2AQ99865 258 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 SPIN2BQ9BPZ2 258 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 TMEM140Q9NV12 185 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 AUP1Q9Y679 476 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 PLXNB1O43157 2135 aa20.06■□□□□ 0.8
RFFL-206ENST00000447669 TIMM23O14925 209 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 SHOXO15266 292 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 TGFAP01135 160 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 NKX2-1P43699 371 aaPredicted RBP20.05■□□□□ 0.8
RFFL-206ENST00000447669 LGALS4P56470 323 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 DCUN1D4Q92564 292 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 AJUBAQ96IF1 538 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 RCL1Q9Y2P8 373 aaKnown RBP20.05■□□□□ 0.8
RFFL-206ENST00000447669 SOX21Q9Y651 276 aaPredicted RBP20.05■□□□□ 0.8
RFFL-206ENST00000447669 TRAV40A0A0B4J280 105 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 IGHV4-31P0DP07 118 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 SPINK9Q5DT21 86 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 BRD3OSQ6XYD6 125 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 FLYWCH2Q96CP2 140 aaKnown RBP20.05■□□□□ 0.8
RFFL-206ENST00000447669 C1orf159Q96HA4 380 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 HARBI1Q96MB7 349 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 WASHC3Q9Y3C0 194 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 NOTCH2Q04721 2471 aa20.05■□□□□ 0.8
RFFL-206ENST00000447669 IGHV4-38-2P0DP08 117 aa20.04■□□□□ 0.8
RFFL-206ENST00000447669 MYOD1P15172 320 aa20.04■□□□□ 0.8
RFFL-206ENST00000447669 CNTFRP26992 372 aa20.04■□□□□ 0.8
RFFL-206ENST00000447669 SAA4P35542 130 aa20.04■□□□□ 0.8
RFFL-206ENST00000447669 RPS16P62249 146 aaKnown RBP20.04■□□□□ 0.8
RFFL-206ENST00000447669 TMEM249Q2WGJ8 235 aa20.04■□□□□ 0.8
RFFL-206ENST00000447669 OR4A47Q6IF82 309 aa20.04■□□□□ 0.8
RFFL-206ENST00000447669 SSSCA1O60232 199 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 RBMXL2O75526 392 aaKnown RBP20.03■□□□□ 0.8
RFFL-206ENST00000447669 DEDDO75618 318 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 SLC25A4P12235 298 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 ERVK-16P61578 105 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 ID3Q02535 119 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 PRSS54Q6PEW0 395 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 FLNAP21333 2647 aaKnown RBP20.03■□□□□ 0.8
RFFL-206ENST00000447669 MSGN1A6NI15 193 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 ST8SIA3O43173 380 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 RAB13P51153 203 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 QTRT1Q9BXR0 403 aaKnown RBP20.03■□□□□ 0.8
RFFL-206ENST00000447669 POMT1Q9Y6A1 747 aa20.03■□□□□ 0.8
RFFL-206ENST00000447669 CLEC9AQ6UXN8 241 aa20.02■□□□□ 0.8
RFFL-206ENST00000447669 PDPNQ86YL7 162 aa20.02■□□□□ 0.8
RFFL-206ENST00000447669 TNFSF18Q9UNG2 199 aa20.02■□□□□ 0.8
RFFL-206ENST00000447669 SMAD7O15105 426 aaKnown RBP20.02■□□□□ 0.79
RFFL-206ENST00000447669 ATG12O94817 140 aa20.02■□□□□ 0.79
RFFL-206ENST00000447669 TMEM50AO95807 157 aa20.02■□□□□ 0.79
RFFL-206ENST00000447669 SAA1P0DJI8 122 aaPredicted RBP20.02■□□□□ 0.79
RFFL-206ENST00000447669 SLC25A6P12236 298 aa20.02■□□□□ 0.79
RFFL-206ENST00000447669 HNF4GQ14541 408 aa20.02■□□□□ 0.79
RFFL-206ENST00000447669 TMEM177Q53S58 311 aa20.02■□□□□ 0.79
RFFL-206ENST00000447669 NPFFO15130 113 aa20.01■□□□□ 0.79
RFFL-206ENST00000447669 CHST1O43916 411 aa20.01■□□□□ 0.79
RFFL-206ENST00000447669 CEACAM3P40198 252 aa20.01■□□□□ 0.79
RFFL-206ENST00000447669 RELBQ01201 579 aa20.01■□□□□ 0.79
RFFL-206ENST00000447669 DHRS7BQ6IAN0 325 aaPredicted RBP20.01■□□□□ 0.79
RFFL-206ENST00000447669 OR4C13Q8NGP0 309 aa20.01■□□□□ 0.79
RFFL-206ENST00000447669 CFHR4Q92496 578 aa20.01■□□□□ 0.79
RFFL-206ENST00000447669 MS4A7Q9GZW8 240 aaPredicted RBP20.01■□□□□ 0.79
RFFL-206ENST00000447669 MFFQ9GZY8 342 aa20.01■□□□□ 0.79
RFFL-206ENST00000447669 TRAV20A0A0B4J274 112 aa20■□□□□ 0.79
RFFL-206ENST00000447669 RNF222A6NCQ9 220 aa20■□□□□ 0.79
RFFL-206ENST00000447669 HMSDA8MTL9 139 aa20■□□□□ 0.79
RFFL-206ENST00000447669 OR2F2O95006 317 aa20■□□□□ 0.79
RFFL-206ENST00000447669 HRASP01112 189 aa20■□□□□ 0.79
RFFL-206ENST00000447669 IGLV2-23P01705 113 aa20■□□□□ 0.79
RFFL-206ENST00000447669 MC5RP33032 325 aa20■□□□□ 0.79
RFFL-206ENST00000447669 TPSG1Q9NRR2 321 aa20■□□□□ 0.79
RFFL-206ENST00000447669 PIGBOS1A0A0B4J2F0 54 aa20■□□□□ 0.79
RFFL-206ENST00000447669 TSC22D2O75157 780 aa20■□□□□ 0.79
RFFL-206ENST00000447669 RRASP10301 218 aa20■□□□□ 0.79
RFFL-206ENST00000447669 IAPPP10997 89 aa20■□□□□ 0.79
RFFL-206ENST00000447669 OSR1Q8TAX0 266 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms