RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 KLHDC1Q8N7A1 406 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 BORCS5Q969J3 196 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 TMEM230Q96A57 120 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 TP53RKQ96S44 253 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 TSNAXQ99598 290 aaKnown RBP10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 CCDC32Q9BV29 185 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 WDR12Q9GZL7 423 aaKnown RBP10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 PRR13Q9NZ81 148 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 SCP2D1Q9UJQ7 156 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 GPR132Q9UNW8 380 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 FBXO7Q9Y3I1 522 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 STAB1Q9NY15 2570 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 DNHD1Q96M86 4753 aa10.48□□□□□ -0.73
HLA-DOB-207ENST00000447394 IGHV7-81A0A0B4J1V7 117 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 ARPC1BO15143 372 aaKnown RBP10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 MPPED1O15442 326 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 SPDEFO95238 335 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 IGHG2P01859 326 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 HLA-DRB1P01911 266 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 F2RP25116 425 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 LPAR6P43657 344 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 RND3P61587 244 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 GNB1P62873 340 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 OSR1Q8TAX0 266 aaPredicted RBP10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 ZFAND1Q8TCF1 268 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 WFDC12Q8WWY7 111 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 ZNF486Q96H40 463 aaPredicted RBP10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 FAM103A1Q9BTL3 118 aaKnown RBP10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 PARP11Q9NR21 331 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 COPZ2Q9P299 210 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 TBC1D24Q9ULP9 559 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 C14orf166Q9Y224 244 aaKnown RBP10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 MMP24Q9Y5R2 645 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 TNCP24821 2201 aa10.47□□□□□ -0.73
HLA-DOB-207ENST00000447394 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 ATP6V0E1O15342 81 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 UPK1BO75841 260 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 IGKV1-39P01597 117 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 IGKV1D-39P04432 117 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 MYOD1P15172 320 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 LGALS7P47929 136 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 COMPP49747 757 aaPredicted RBP10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 UBE2KP61086 200 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 CX3CL1P78423 397 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 SURF2Q15527 256 aaPredicted RBP10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 LIN54Q6MZP7 749 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 C12orf54Q6X4T0 127 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 TMED4Q7Z7H5 227 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 RNF5Q99942 180 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 FLVCR2Q9UPI3 526 aa10.46□□□□□ -0.73
HLA-DOB-207ENST00000447394 C3orf85A0A1B0GTC6 90 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 CRYM-AS1A6NIL9 109 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 RBFOX2O43251 390 aaKnown RBP eCLIP10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 LYRM1O43325 122 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 OR5AC1P0C628 307 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 AKR1C4P17516 323 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 G6PCP35575 357 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 ECI1P42126 302 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 VMA21Q3ZAQ7 101 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 C10orf55Q5SWW7 151 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 OR4A47Q6IF82 309 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 PPP1R27Q86WC6 154 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 PUSL1Q8N0Z8 303 aaKnown RBP10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 CCDC71LQ8N9Z2 235 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 POC5Q8NA72 575 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 GRPEL2Q8TAA5 225 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 ABHD5Q8WTS1 349 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 R3HDM4Q96D70 268 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 RHOVQ96L33 236 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 WNT10AQ9GZT5 417 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 OR51J1Q9H342 316 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 NAA60Q9H7X0 242 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 ZNF430Q9H8G1 570 aaPredicted RBP10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 WSB1Q9Y6I7 421 aa10.45□□□□□ -0.74
HLA-DOB-207ENST00000447394 TEX13DA0A0J9YY54 714 aaPredicted RBP10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 G3V318 75 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 H0Y980 276 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 KBTBD11O94819 623 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 HPRT1P00492 218 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 KRASP01116 189 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 APELAP0DMC3 54 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 EGR2P11161 476 aaPredicted RBP10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 S100GP29377 79 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 TNXAQ16473 311 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 PRSS8Q16651 343 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 IZUMO4Q1ZYL8 232 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 ZNF329Q86UD4 541 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 LHFPL5Q8TAF8 219 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 WIPF2Q8TF74 440 aaPredicted RBP10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 PLEKHA2Q9HB19 425 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 TMEM140Q9NV12 185 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 COMMD9Q9P000 198 aa10.44□□□□□ -0.74
HLA-DOB-207ENST00000447394 A0A1B0GUS0 222 aa10.43□□□□□ -0.74
HLA-DOB-207ENST00000447394 NAP1L6A6NFF2 107 aa10.43□□□□□ -0.74
HLA-DOB-207ENST00000447394 MARCH11A6NNE9 402 aa10.43□□□□□ -0.74
HLA-DOB-207ENST00000447394 NDUFB6O95139 128 aa10.43□□□□□ -0.74
HLA-DOB-207ENST00000447394 CD28P10747 220 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms