RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MAS1LP35410 378 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 EMP1P54849 157 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 GK3PQ14409 553 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 PIGYQ3MUY2 71 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 DMKNQ6E0U4 476 aaPredicted RBP2.18□□□□□ -2.06
PMS1-215ENST00000447232 BCDIN3DQ7Z5W3 292 aaKnown RBP2.18□□□□□ -2.06
PMS1-215ENST00000447232 PRSS35Q8N3Z0 413 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 GNPDA2Q8TDQ7 276 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 EEF1AKMT3Q96AZ1 226 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 ADAT3Q96EY9 351 aaPredicted RBP2.18□□□□□ -2.06
PMS1-215ENST00000447232 C7orf34Q96L11 122 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 NR1H4Q96RI1 486 aaPredicted RBP2.18□□□□□ -2.06
PMS1-215ENST00000447232 SH3GL1Q99961 368 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 TM2D1Q9BX74 207 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 YIPF3Q9GZM5 350 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 GORASP2Q9H8Y8 452 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 PIPOXQ9P0Z9 390 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 ZNF257Q9Y2Q1 563 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 RIIAD1A6NNX1 92 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 RAB29O14966 203 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 ANGPT2O15123 496 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 DIRAS1O95057 198 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 NUDT2P50583 147 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 TWIST1Q15672 202 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 C6orf183Q5T699 404 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 C10orf25Q5T742 122 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 SYT6Q5T7P8 510 aaPredicted RBP2.18□□□□□ -2.06
PMS1-215ENST00000447232 Q6ZRU5 148 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 C19orf35Q6ZS72 473 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 RASSF6Q6ZTQ3 369 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 SSX9Q7RTT3 188 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 PDPNQ86YL7 162 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 FAM24BQ8N5W8 94 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 ZNF383Q8NA42 475 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 OR2T33Q8NG76 320 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 ASB17Q8WXJ9 295 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 OR2A7Q96R45 310 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 TSSK6Q9BXA6 273 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 OR51V1Q9H2C8 321 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 SMPXQ9UHP9 88 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 HSF4Q9ULV5 492 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 GTF2A1LQ9UNN4 478 aa2.18□□□□□ -2.06
PMS1-215ENST00000447232 MRPS16Q9Y3D3 137 aaKnown RBP2.18□□□□□ -2.06
PMS1-215ENST00000447232 TRBV7-1A0A0A6YYK4 115 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 MFSD2BA6NFX1 497 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 CHEK1O14757 476 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 ARPC2O15144 300 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 GSTT2P0CG29 244 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 GSTT2BP0CG30 244 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 RPA2P15927 270 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 RCC1P18754 421 aaPredicted RBP2.17□□□□□ -2.06
PMS1-215ENST00000447232 SLC2A5P22732 501 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 IFNGR2P38484 337 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 CYLC2Q14093 348 aaPredicted RBP2.17□□□□□ -2.06
PMS1-215ENST00000447232 CLINT1Q14677 625 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 PRSS8Q16651 343 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 NHLRC3Q5JS37 347 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 SAMD4BQ5PRF9 694 aaKnown RBP2.17□□□□□ -2.06
PMS1-215ENST00000447232 TRAT1Q6PIZ9 186 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 PLEKHG7Q6ZR37 379 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 ZNF554Q86TJ5 538 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 NFE4Q86UQ8 179 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 GBGT1Q8N5D6 347 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 PXT1Q8NFP0 134 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 OR2T12Q8NG77 320 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 OR2AK2Q8NG84 335 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 ZNF414Q96IQ9 312 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 AGMATQ9BSE5 352 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 TTTY10Q9BZA0 68 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 NEK6Q9HC98 313 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 SLC35D1Q9NTN3 355 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 ST3GAL6Q9Y274 331 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 FAM32AQ9Y421 112 aaKnown RBP2.17□□□□□ -2.06
PMS1-215ENST00000447232 GMPPBQ9Y5P6 360 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 RFNGQ9Y644 331 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 V9GYQ6 96 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 TRAV2A0A0B4J234 112 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 LRCOL1A6NCL2 159 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 SRRM4A7MD48 611 aaKnown RBP2.17□□□□□ -2.06
PMS1-215ENST00000447232 C15orf62A8K5M9 175 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 NPIPB5A8MRT5 1133 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 MAGEB4O15481 346 aaPredicted RBP2.17□□□□□ -2.06
PMS1-215ENST00000447232 GADD45GO95257 159 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 TMEM225BP0DP42 221 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 GPR183P32249 361 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 DAD1P61803 113 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 LIPEQ05469 1076 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 CKAP4Q07065 602 aaKnown RBP2.17□□□□□ -2.06
PMS1-215ENST00000447232 ESRGQ1W209 222 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 ODF4Q2M2E3 257 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 SLC35D3Q5M8T2 416 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 PLET1Q6UQ28 207 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 CEACAM19Q7Z692 300 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 SLC25A42Q86VD7 318 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 DRAXINQ8NBI3 349 aaPredicted RBP2.17□□□□□ -2.06
PMS1-215ENST00000447232 OR4K15Q8NH41 348 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 ZNF502Q8TBZ5 544 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 SPIN2AQ99865 258 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 APOL4Q9BPW4 351 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 SPIN2BQ9BPZ2 258 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms