RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 SMIM17P0DL12 118 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 RPL7P18124 248 aaKnown RBP3.24□□□□□ -1.89
VPS50-206ENST00000443443 NPY1RP25929 384 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 ATP5G3P48201 142 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 POLR2HP52434 150 aaKnown RBP3.24□□□□□ -1.89
VPS50-206ENST00000443443 TIMM10P62072 90 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 MMDQ15546 238 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 CST6Q15828 149 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 NEDD8Q15843 81 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 HES3Q5TGS1 186 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 BAP18Q8IXM2 172 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 KRTCAP2Q8N6L1 136 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 NUP35Q8NFH5 326 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 OR5H2Q8NGV7 314 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 SLC25A40Q8TBP6 338 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 C7orf33Q8WU49 177 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 CACYBPQ9HB71 228 aaKnown RBP3.24□□□□□ -1.89
VPS50-206ENST00000443443 POPDC3Q9HBV1 291 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 COA4Q9NYJ1 87 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 TVP23BQ9NYZ1 205 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 DEC1Q9P2X7 70 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 RPS6KB2Q9UBS0 482 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 LAMTOR2Q9Y2Q5 125 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 OVOS2A0A0J9YW53 1432 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 OVOS2Q6IE36 1432 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 MED23Q9ULK4 1368 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 FAM135AQ9P2D6 1515 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 DCAF1Q9Y4B6 1507 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 KIF1BO60333 1816 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 MEIKINA0A087WXM9 373 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 LOC102724200A0A096LPH7 203 aaPredicted RBP3.23□□□□□ -1.89
VPS50-206ENST00000443443 TRAV4A0A0B4J268 109 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 C9orf170A2RU37 121 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 NKX2-6A6NCS4 301 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 KRTAP4-16G5E9R7 235 aaPredicted RBP3.23□□□□□ -1.89
VPS50-206ENST00000443443 J3QRK9 145 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 M0R2Z0 102 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 SLC25A14O95258 325 aaPredicted RBP3.23□□□□□ -1.89
VPS50-206ENST00000443443 RPS3P23396 243 aaKnown RBP eCLIP3.23□□□□□ -1.89
VPS50-206ENST00000443443 NOS1P29475 1434 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 CA7P43166 264 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 DIO3P55073 304 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 MRPS10P82664 201 aaKnown RBP3.23□□□□□ -1.89
VPS50-206ENST00000443443 MORN2Q502X0 79 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 MPV17L2Q567V2 206 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 GLT8D1Q68CQ7 371 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 GUSBP11Q6P575 273 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 CEMP1Q6PRD7 247 aaPredicted RBP3.23□□□□□ -1.89
VPS50-206ENST00000443443 IL34Q6ZMJ4 242 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 Q6ZS49 121 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 SSH2Q76I76 1423 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 CAMK2N1Q7Z7J9 78 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 OR8I2Q8N0Y5 310 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 EXOC3-AS1Q8N2X6 119 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 ZNF645Q8N7E2 425 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 YIPF7Q8N8F6 280 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 TMEM229BQ8NBD8 167 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 SLC30A7Q8NEW0 376 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 NPBQ8NG41 125 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 OR13C8Q8NGS7 320 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 ARL11Q969Q4 196 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 GNPNAT1Q96EK6 184 aaPredicted RBP3.23□□□□□ -1.89
VPS50-206ENST00000443443 ADAT3Q96EY9 351 aaPredicted RBP3.23□□□□□ -1.89
VPS50-206ENST00000443443 PDXPQ96GD0 296 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 C18orf15Q96N68 181 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 CCL13Q99616 98 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 THTPAQ9BU02 230 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 PDCD10Q9BUL8 212 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 AK3Q9UIJ7 227 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 TBX21Q9UL17 535 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 COQ4Q9Y3A0 265 aa3.23□□□□□ -1.89
VPS50-206ENST00000443443 A2MP01023 1474 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 DUXBA0A1W2PPF3 345 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 CLDN25C9JDP6 229 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 IGF2P01344 180 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 IGLV2-8P01709 118 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 IFNA4P05014 189 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 METTL15P1P0C7V9 234 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 EVI2AP22794 236 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 RBP2P50120 134 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 WNT4P56705 351 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 GNG2P59768 71 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 SELENOWP63302 87 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 PSG9Q00887 426 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 DHRS2Q13268 280 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 TAF9Q16594 264 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 TMEM241Q24JQ0 296 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 MRPL2Q5T653 305 aaKnown RBP3.22□□□□□ -1.89
VPS50-206ENST00000443443 LYRM7Q5U5X0 104 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 EBLN2Q6P2I7 272 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 Q6Q795 121 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 ZNF429Q86V71 674 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 LRP11Q86VZ4 500 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 PDPNQ86YL7 162 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 SLC22A24Q8N4F4 322 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 LINC01555Q8NAE3 123 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 ZNF555Q8NEP9 628 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 OR2M3Q8NG83 312 aa3.22□□□□□ -1.89
VPS50-206ENST00000443443 FAM57AQ8TBR7 257 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms