RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MESTQ5EB52 335 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 GLYATL3Q5SZD4 288 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 HRCT1Q6UXD1 115 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF497Q6ZNH5 498 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 MRPL55Q7Z7F7 128 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF329Q86UD4 541 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 BLNKQ8WV28 456 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 FAM151AQ8WW52 585 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 BORCS7Q96B45 105 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF689Q96CS4 500 aaPredicted RBP3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 SLC35E1Q96K37 410 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR2M4Q96R27 311 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 ANAPC13Q9BS18 74 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 EMC6Q9BV81 110 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 ULBP3Q9BZM4 244 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 COA1Q9GZY4 146 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 SAR1AQ9NR31 198 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 COMMD9Q9P000 198 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 TMEM131Q92545 1883 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 PXDNLA1KZ92 1463 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 PRXQ9BXM0 1461 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 C10orf71Q711Q0 1435 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 LOC107984640A0A0U1RRK4 108 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 hADV38S2A0JD32 116 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 GYPCP04921 128 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 MIPP30301 263 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 AGTR1P30556 359 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 DCDP81605 110 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 PRDX4Q13162 271 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 TMEM241Q24JQ0 296 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 CLEC12BQ2HXU8 276 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 CEACAM16Q2WEN9 425 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 C6orf52Q5T4I8 152 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 GLT8D1Q68CQ7 371 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 RASL11AQ6T310 242 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 RFLNAQ6ZTI6 216 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 MOB1BQ7L9L4 216 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF720Q7Z2F6 126 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 TMEM150AQ86TG1 271 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 TCTE3Q8IZS6 198 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 COX18Q8N8Q8 333 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 NKAPP1Q8N9T2 125 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR10D3Q8NH80 312 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 RXFP4Q8TDU9 374 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 KLK6Q92876 244 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 BMFQ96LC9 184 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 LYSMD1Q96S90 227 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 HSD17B10Q99714 261 aaKnown RBP3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR2H1Q9GZK4 316 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 RBM22Q9NW64 420 aaKnown RBP eCLIP3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 SPANXCQ9NY87 97 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 XCL2Q9UBD3 114 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 COMMD3Q9UBI1 195 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 NAT8Q9UHE5 227 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 KLK13Q9UKR3 277 aa3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 COL5A2P05997 1499 aaPredicted RBP3.04□□□□□ -1.92
CDC42BPA-207ENST00000441725 SBF2Q86WG5 1849 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 TRIP11Q15643 1979 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 SCN10AQ9Y5Y9 1956 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 A0A0J9YWU9 116 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 ZNF354AO60765 605 aaPredicted RBP3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 KCNK2O95069 426 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 PAEPP09466 180 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR5G3P0C626 314 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 FGF6P10767 208 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 RAB5AP20339 215 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 CNTFRP26992 372 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 SLC35A1P78382 337 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 IHHQ14623 411 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 KIAA0040Q15053 153 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 PRR30Q53SZ7 412 aaPredicted RBP3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 RPL22L1Q6P5R6 122 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 LINC00299Q6ZSB3 139 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 GPR26Q8NDV2 337 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR11H6Q8NGC7 330 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR4K5Q8NGD3 323 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR5A2Q8NGI9 324 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR2G3Q8NGZ4 309 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 CARD19Q96LW7 228 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 SIGLEC12Q96PQ1 595 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 PBDC1Q9BVG4 233 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 OR51E2Q9H255 320 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 MMP26Q9NRE1 261 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 CBLN4Q9NTU7 201 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 CLCF1Q9UBD9 225 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 XRN1Q8IZH2 1706 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 LRRIQ1Q96JM4 1722 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 TONSLQ96HA7 1378 aa3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 PHRF1Q9P1Y6 1649 aaKnown RBP3.03□□□□□ -1.92
CDC42BPA-207ENST00000441725 TOPAZ1Q8N9V7 1692 aa3.03□□□□□ -1.93
CDC42BPA-207ENST00000441725 A0A087WWV3 80 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 CLDN25C9JDP6 229 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 H7C1C5 153 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 UPK1AO00322 258 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 PHOX2AO14813 284 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 AIFM1O95831 613 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 MAS1P04201 325 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 OR4Q2P0C623 313 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 LINC00694P0DN24 101 aa3.02□□□□□ -1.93
CDC42BPA-207ENST00000441725 MYL9P24844 172 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms