RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TSPAN15O95858 294 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 HRASP01112 189 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 PPIFP30405 207 aaKnown RBP9.27□□□□□ -0.93
HSPG2-206ENST00000439717 SLC6A1P30531 599 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 BRWD1-AS2P59051 145 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 NDPQ00604 133 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 FXYD3Q14802 87 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 AKIRIN2Q53H80 203 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 CXorf66Q5JRM2 361 aaPredicted RBP9.27□□□□□ -0.93
HSPG2-206ENST00000439717 HIST2H2BDQ6DRA6 164 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 STEAP1BQ6NZ63 245 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 CCDC190Q86UF4 302 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 LHFPL1Q86WI0 220 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 SPAG16Q8N0X2 631 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 MINDY2Q8NBR6 621 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 VSTM2AQ8TAG5 236 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 ABHD5Q8WTS1 349 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 ARPC1AQ92747 370 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 GPHA2Q96T91 129 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 TPSG1Q9NRR2 321 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 NUBP2Q9Y5Y2 271 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 WSB1Q9Y6I7 421 aa9.27□□□□□ -0.93
HSPG2-206ENST00000439717 G3V318 75 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 RAMP3O60896 148 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 OR2A4O95047 310 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 CNIH1O95406 144 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 HPRT1P00492 218 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 IGLV1-40P01703 118 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 AKAIN1P0CW23 69 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 SAA1P0DJI8 122 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-206ENST00000439717 EGR2P11161 476 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-206ENST00000439717 PSMB8P28062 276 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 TAS2R31P59538 309 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 RPL23AP62750 156 aaKnown RBP9.26□□□□□ -0.93
HSPG2-206ENST00000439717 PJVKQ0ZLH3 352 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 PRSS8Q16651 343 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 C19orf54Q5BKX5 351 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 KHDC1LQ5JSQ8 128 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 OR51H1Q8NH63 302 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 TERB2Q8NHR7 220 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 ZNF486Q96H40 463 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-206ENST00000439717 TMEM68Q96MH6 324 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 OR2A7Q96R45 310 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 FAM212BQ9NTI7 297 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-206ENST00000439717 FBXO7Q9Y3I1 522 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 V9GYH0 126 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 CMYA5Q8N3K9 4069 aa9.26□□□□□ -0.93
HSPG2-206ENST00000439717 A0A1W2PRX2 142 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 ANKRD20A5PA0PJZ0 165 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 DISC1C4P0D8 188 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 ARPC1BO15143 372 aaKnown RBP9.25□□□□□ -0.93
HSPG2-206ENST00000439717 RLN1P04808 185 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 NQO2P16083 231 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 F2RP25116 425 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 ETV6P41212 452 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 ECI1P42126 302 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 GNB1P62873 340 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 SSBP2P81877 361 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-206ENST00000439717 POU2AF1Q16633 256 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 ECSCRQ19T08 205 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 MRGPRG-AS1Q2M3A8 158 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 PYDC2Q56P42 97 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 SPANXN2Q5MJ10 180 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 FOXB2Q5VYV0 432 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 TMEM65Q6PI78 240 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 MMD2Q8IY49 270 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 PUSL1Q8N0Z8 303 aaKnown RBP9.25□□□□□ -0.93
HSPG2-206ENST00000439717 OR4D10Q8NGI6 311 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 OR6Q1Q8NGQ2 317 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 FAM110DQ8TAY7 271 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-206ENST00000439717 TMEM167AQ8TBQ9 72 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 R3HDM4Q96D70 268 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 RHOVQ96L33 236 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 THAP7Q9BT49 309 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-206ENST00000439717 PLEKHA2Q9HB19 425 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 COMMD9Q9P000 198 aa9.25□□□□□ -0.93
HSPG2-206ENST00000439717 FOXA2Q9Y261 457 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-206ENST00000439717 ACTL6BO94805 426 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 KBTBD11O94819 623 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 RPLP1P05386 114 aaKnown RBP9.24□□□□□ -0.93
HSPG2-206ENST00000439717 ZNF735P0CB33 412 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 PF4V1P10720 104 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 PGAM2P15259 253 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 CD40LGP29965 261 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 MAS1LP35410 378 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 CDX1P47902 265 aaPredicted RBP9.24□□□□□ -0.93
HSPG2-206ENST00000439717 RND3P61587 244 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 SCGB2B2Q4G0G5 96 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 PHLDA2Q53GA4 152 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 UNQ5815/PRO19632Q6UWF5 114 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 IDO2Q6ZQW0 420 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 VKORC1L1Q8N0U8 176 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 CADM3Q8N126 398 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 LFNGQ8NES3 379 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 OR4C16Q8NGL9 310 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 OR4A5Q8NH83 315 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 GRPEL2Q8TAA5 225 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 ZFAND1Q8TCF1 268 aa9.24□□□□□ -0.93
HSPG2-206ENST00000439717 MYOZ3Q8TDC0 251 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms