RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 RRHO14718 337 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 SFT2D2O95562 160 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 CDS2O95674 445 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 FGF2P09038 288 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 OR4E1P0C645 316 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 LPAR6P43657 344 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 ERVK-16P61578 105 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 SUPT4H1P63272 117 aaKnown RBP14.67□□□□□ -0.06
HDAC6-208ENST00000438518 FAM71E2Q8N5Q1 922 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 C5orf56Q8N8D9 126 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 Q8N9W7 124 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 TEX45Q8NA69 505 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 GLYATL2Q8WU03 294 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 TMEM56Q96MV1 263 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 MARVELD1Q9BSK0 173 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 TNFRSF19Q9NS68 423 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 TMEM56-RWDD3S4R434 201 aa14.67□□□□□ -0.06
HDAC6-208ENST00000438518 TRAV6A0A075B6T7 132 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 DUXBA0A1W2PPF3 345 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 CHST1O43916 411 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 PRAF2O60831 178 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 S1PR2O95136 353 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 HLA-AP01891 365 aaKnown RBP14.66□□□□□ -0.06
HDAC6-208ENST00000438518 CRYBA1P05813 215 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 VSIG10L2P0DP72 767 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 VAMP1P23763 118 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 F2RL1P55085 397 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 PPP1R1AQ13522 171 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 PSG5Q15238 335 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 TRIM16LQ309B1 348 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 LGI3Q8N145 548 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 MINDY2Q8NBR6 621 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 OR4A5Q8NH83 315 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 RBPMSQ93062 196 aaKnown RBP14.66□□□□□ -0.06
HDAC6-208ENST00000438518 R3HDM4Q96D70 268 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 RHOVQ96L33 236 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 DUX5Q96PT3 197 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 RASL11BQ9BPW5 248 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 BET1LQ9NYM9 111 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 METTL1Q9UBP6 276 aaKnown RBP14.66□□□□□ -0.06
HDAC6-208ENST00000438518 CUBNO60494 3623 aa14.66□□□□□ -0.06
HDAC6-208ENST00000438518 MARCH11A6NNE9 402 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 DUS4LO95620 317 aaKnown RBP14.65□□□□□ -0.06
HDAC6-208ENST00000438518 DHFRP00374 187 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 IGLV2-23P01705 113 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 ANXA7P20073 488 aaKnown RBP14.65□□□□□ -0.06
HDAC6-208ENST00000438518 TMEM187Q14656 261 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 PLGLAQ15195 96 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 C5orf64Q2M2E5 130 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 C4orf46Q504U0 113 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 FBLN7Q53RD9 439 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 LYG2Q86SG7 212 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 ZNF695Q8IW36 515 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 LRTM2Q8N967 370 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 DMBX1Q8NFW5 382 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 RITA1Q96K30 269 aa14.65□□□□□ -0.06
HDAC6-208ENST00000438518 C9orf170A2RU37 121 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 FAM181BA6NEQ2 426 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 SRRM4A7MD48 611 aaKnown RBP14.64□□□□□ -0.07
HDAC6-208ENST00000438518 INMT-MINDY4F8WBC2 141 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 SLC25A17O43808 307 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 OR2A4O95047 310 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 HLA-DRB1P01911 266 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 IL5P05113 134 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 CRYGBP07316 175 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 SAA1P0DJI8 122 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-208ENST00000438518 DHRS2Q13268 280 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 SP6Q3SY56 376 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 PPP1R27Q86WC6 154 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 FAM219AQ8IW50 185 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 PUSL1Q8N0Z8 303 aaKnown RBP14.64□□□□□ -0.07
HDAC6-208ENST00000438518 COQ8AQ8NI60 647 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 OR2A7Q96R45 310 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 PRSS22Q9GZN4 317 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 GPN1Q9HCN4 374 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-208ENST00000438518 SIGLEC9Q9Y336 463 aa14.64□□□□□ -0.07
HDAC6-208ENST00000438518 A0A0B4J2A0 478 aa14.63□□□□□ -0.07
HDAC6-208ENST00000438518 KCNAB3O43448 404 aa14.63□□□□□ -0.07
HDAC6-208ENST00000438518 CNTFRP26992 372 aa14.63□□□□□ -0.07
HDAC6-208ENST00000438518 AKR1C2P52895 323 aa14.63□□□□□ -0.07
HDAC6-208ENST00000438518 RAB25P57735 213 aa14.63□□□□□ -0.07
HDAC6-208ENST00000438518 LIN54Q6MZP7 749 aa14.63□□□□□ -0.07
HDAC6-208ENST00000438518 RRNAD1Q96FB5 475 aaKnown RBP14.63□□□□□ -0.07
HDAC6-208ENST00000438518 SEC22AQ96IW7 307 aa14.63□□□□□ -0.07
HDAC6-208ENST00000438518 SHPKQ9UHJ6 478 aa14.63□□□□□ -0.07
HDAC6-208ENST00000438518 TEP1Q99973 2627 aaKnown RBP14.62□□□□□ -0.07
HDAC6-208ENST00000438518 TSPAN9O75954 239 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 KBTBD11O94819 623 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 KRASP01116 189 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 IGKV1-39P01597 117 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 IGKV1D-39P04432 117 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 AMY1AP04745 511 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 MAS1LP35410 378 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 OR4A47Q6IF82 309 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 MMD2Q8IY49 270 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 TMEM167AQ8TBQ9 72 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 LSM10Q969L4 123 aaKnown RBP14.62□□□□□ -0.07
HDAC6-208ENST00000438518 PHB2Q99623 299 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 FBXL15Q9H469 300 aa14.62□□□□□ -0.07
HDAC6-208ENST00000438518 TMEM140Q9NV12 185 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms