RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 GLRXP35754 106 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 RAB31Q13636 194 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 SSX7Q7RTT5 188 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 MRPL41Q8IXM3 137 aaKnown RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 HSD17B10Q99714 261 aaKnown RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 ARV1Q9H2C2 271 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 ARHGAP21Q5T5U3 1957 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 FAM87AP0C7U9 286 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 S100A7P31151 101 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 CD81P60033 236 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 FAM216BQ8N7L0 139 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 ZBTB34Q8NCN2 500 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 OR10G4Q8NGN3 311 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 OR10G9Q8NGN4 311 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 OR10G7Q8NGN6 311 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 OR10X1Q8NGY0 326 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 COQ2Q96H96 371 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 OR5B12Q96R08 314 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 SAP30LQ9HAJ7 183 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 ANKRD11Q6UB99 2663 aaPredicted RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 H3BQ15 152 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 RPLP1P05386 114 aaKnown RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 NCR3LG1Q68D85 454 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 LSM10Q969L4 123 aaKnown RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 SNX22Q96L94 193 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 CABLES2Q9BTV7 478 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 ACTR3CQ9C0K3 210 aaPredicted RBP9.55□□□□□ -0.88
CLDN4-202ENST00000431918 CALYQ9NYX4 217 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 SPTBN4Q9H254 2564 aa9.55□□□□□ -0.88
CLDN4-202ENST00000431918 DLEU1O43261 78 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 OR5I1Q13606 314 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 TMEM147Q9BVK8 224 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 ELOVL1Q9BW60 279 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF737O75373 536 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 TNFSF13O75888 250 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 MMP9P14780 707 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 GFI1BQ5VTD9 330 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 TRAT1Q6PIZ9 186 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 CD177Q8N6Q3 437 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 SSMEM1Q8WWF3 244 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 C22orf15Q8WYQ4 148 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 TVP23CQ96ET8 276 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 PATZ1Q9HBE1 687 aaKnown RBP9.54□□□□□ -0.88
CLDN4-202ENST00000431918 TUBG2Q9NRH3 451 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 KIAA1456Q9P272 454 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 SLC25A15Q9Y619 301 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 DOPEY2Q9Y3R5 2298 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 ANKHD1Q8IWZ3 2542 aaKnown RBP9.54□□□□□ -0.88
CLDN4-202ENST00000431918 TNRC6AQ8NDV7 1962 aaKnown RBP9.54□□□□□ -0.88
CLDN4-202ENST00000431918 ARFGEF3Q5TH69 2177 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 SPG11Q96JI7 2443 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 SIAH2O43255 324 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 NPSP0C0P6 89 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 OR4A8P0C604 315 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 Q6ZS49 121 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 Q8NFD4 153 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 TMEM208Q9BTX3 173 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 KIAA1549Q9HCM3 1950 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 A6NNC1 897 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 KRTCAP3Q53RY4 240 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 TAF15Q92804 592 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLDN4-202ENST00000431918 SCNM1Q9BWG6 230 aa9.54□□□□□ -0.88
CLDN4-202ENST00000431918 CD40P25942 277 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 DLK1P80370 383 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 C1orf87Q8N0U7 546 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 PLA2G2EQ9NZK7 142 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 K7N7A8 449 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 QTRT1Q9BXR0 403 aaKnown RBP9.53□□□□□ -0.88
CLDN4-202ENST00000431918 VSIRQ9H7M9 311 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 PLEKHA3Q9HB20 300 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 MALRD1Q5VYJ5 2156 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 ELOA3CA0A087WX78 387 aaPredicted RBP9.53□□□□□ -0.88
CLDN4-202ENST00000431918 DEFA4P12838 97 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 RPL31P62899 125 aaKnown RBP9.53□□□□□ -0.88
CLDN4-202ENST00000431918 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLDN4-202ENST00000431918 ZNF585BQ52M93 769 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 ABHD12Q8N2K0 398 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 RAB39BQ96DA2 213 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 SFXN3Q9BWM7 321 aa9.53□□□□□ -0.88
CLDN4-202ENST00000431918 AURKAIP1Q9NWT8 199 aaPredicted RBP9.53□□□□□ -0.88
CLDN4-202ENST00000431918 TNCP24821 2201 aa9.52□□□□□ -0.88
CLDN4-202ENST00000431918 PPIHO43447 177 aaKnown RBP9.52□□□□□ -0.88
CLDN4-202ENST00000431918 IGKV1-39P01597 117 aa9.52□□□□□ -0.88
CLDN4-202ENST00000431918 APOA2P02652 100 aa9.52□□□□□ -0.88
CLDN4-202ENST00000431918 IGKV1D-39P04432 117 aa9.52□□□□□ -0.88
CLDN4-202ENST00000431918 ERVK11-1P61568 191 aa9.52□□□□□ -0.88
CLDN4-202ENST00000431918 RTL8BQ17RB0 113 aa9.52□□□□□ -0.88
CLDN4-202ENST00000431918 ACOT6Q3I5F7 207 aaPredicted RBP9.52□□□□□ -0.88
CLDN4-202ENST00000431918 GCSAMQ8N6F7 178 aa9.52□□□□□ -0.88
CLDN4-202ENST00000431918 OR4S2Q8NH73 311 aa9.52□□□□□ -0.88
CLDN4-202ENST00000431918 hADV38S2A0JD32 116 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 IFNL4K9M1U5 179 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 KITLGP21583 273 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 PLGLAQ15195 96 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 SLC35D1Q9NTN3 355 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 NDUFB3O43676 98 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 TRGC2P03986 189 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 ARSJQ5FYB0 599 aaPredicted RBP9.52□□□□□ -0.89
CLDN4-202ENST00000431918 ZNF525Q8N782 197 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 FAM57AQ8TBR7 257 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms