RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 A0A1W2PPE3 182 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 CRYBA1P05813 215 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 IL6RP08887 468 aaPredicted RBP11.46□□□□□ -0.57
HOXC4-202ENST00000430889 BCL2P10415 239 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 IRF2P14316 349 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 MAS1LP35410 378 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 TFF3Q07654 80 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 SPINK9Q5DT21 86 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 PRAMEF5Q5TYX0 476 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 SLC25A48Q6ZT89 311 aaKnown RBP11.46□□□□□ -0.57
HOXC4-202ENST00000430889 ZCCHC14Q8WYQ9 949 aaKnown RBP11.46□□□□□ -0.57
HOXC4-202ENST00000430889 ADTRPQ96IZ2 230 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 VKORC1Q9BQB6 163 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 TMEM140Q9NV12 185 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 PCNX1Q96RV3 2341 aa11.46□□□□□ -0.57
HOXC4-202ENST00000430889 YLPM1P49750 1951 aaKnown RBP11.46□□□□□ -0.57
HOXC4-202ENST00000430889 TRGV8A0A0C4DH27 118 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 H3BQ15 152 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 TMEM178BH3BS89 294 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 M0R036 132 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 ATXN7O15265 892 aaPredicted RBP11.46□□□□□ -0.58
HOXC4-202ENST00000430889 FBP1P09467 338 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 FAM87AP0C7U9 286 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 FGF7P21781 194 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 MRPS11P82912 194 aaKnown RBP11.46□□□□□ -0.58
HOXC4-202ENST00000430889 NCMAPQ5T1S8 102 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 AVPI1Q5T686 147 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 FAM90A2PQ658T7 463 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 ADAM5Q6NVV9 412 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 LCN15Q6UWW0 184 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 VKORC1L1Q8N0U8 176 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.58
HOXC4-202ENST00000430889 OR10A7Q8NGE5 316 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 CA5BP1Q8WTZ4 195 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 TMEM170AQ8WVE7 144 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 RND1Q92730 232 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 C20orf24Q9BUV8 137 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 NPCDR1Q9BY65 106 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 WDR83OSQ9Y284 106 aa11.46□□□□□ -0.58
HOXC4-202ENST00000430889 KLF2Q9Y5W3 355 aaPredicted RBP11.46□□□□□ -0.58
HOXC4-202ENST00000430889 ARFGEF3Q5TH69 2177 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 SPTBN2O15020 2390 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 TRAV38-1A0A0B4J264 116 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 MAP1LC3B2A6NCE7 125 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 C15orf61A6NNL5 157 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 NDUFA2O43678 99 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 ELLP55199 621 aaPredicted RBP11.45□□□□□ -0.58
HOXC4-202ENST00000430889 TMPRSS3P57727 454 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 ERVK-16P61578 105 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 RBPJQ06330 500 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 MEF2CQ06413 473 aaPredicted RBP11.45□□□□□ -0.58
HOXC4-202ENST00000430889 SSX9Q7RTT3 188 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 OR4A16Q8NH70 328 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 MAP1LC3BQ9GZQ8 125 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 TMEM14BQ9NUH8 114 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 GNG13Q9P2W3 67 aa11.45□□□□□ -0.58
HOXC4-202ENST00000430889 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
HOXC4-202ENST00000430889 hADV38S2A0JD32 116 aa11.44□□□□□ -0.58
HOXC4-202ENST00000430889 E7EQL1 145 aa11.44□□□□□ -0.58
HOXC4-202ENST00000430889 RBMXL2O75526 392 aaKnown RBP11.44□□□□□ -0.58
HOXC4-202ENST00000430889 DAOP14920 347 aa11.44□□□□□ -0.58
HOXC4-202ENST00000430889 FGF8P55075 233 aaPredicted RBP11.44□□□□□ -0.58
HOXC4-202ENST00000430889 TLE1Q04724 770 aa11.44□□□□□ -0.58
HOXC4-202ENST00000430889 RNF212Q495C1 297 aa11.44□□□□□ -0.58
HOXC4-202ENST00000430889 AKIRIN2Q53H80 203 aa11.44□□□□□ -0.58
HOXC4-202ENST00000430889 RNASE6Q93091 150 aaKnown RBP11.44□□□□□ -0.58
HOXC4-202ENST00000430889 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
HOXC4-202ENST00000430889 PUS1Q9Y606 427 aaKnown RBP eCLIP11.44□□□□□ -0.58
HOXC4-202ENST00000430889 A0A087WWC5 75 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 CTXND1A0A1B0GTU2 59 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 NDUFS6O75380 124 aaKnown RBP11.43□□□□□ -0.58
HOXC4-202ENST00000430889 IFNA17P01571 189 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 MBP02144 154 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 MT-ND4LP03901 98 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 RPS16P62249 146 aaKnown RBP11.43□□□□□ -0.58
HOXC4-202ENST00000430889 SLC35E3Q7Z769 313 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 LYG1Q8N1E2 194 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 RAB39BQ96DA2 213 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 P2RX4Q99571 388 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 GGACTQ9BVM4 153 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 SAP30LQ9HAJ7 183 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 SLC25A10Q9UBX3 287 aaPredicted RBP11.43□□□□□ -0.58
HOXC4-202ENST00000430889 MLXQ9UH92 298 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 PIEZO2Q9H5I5 2752 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 A0A1W2PPE2 198 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 A0A1W2PPH5 198 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 RRHO14718 337 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 TMPRSS2O15393 492 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 CT45A6P0DMU7 189 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 CT45A5P0DMU8 189 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 CT45A7P0DMV0 189 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 RAB13P51153 203 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 HABP2Q14520 560 aaPredicted RBP11.43□□□□□ -0.58
HOXC4-202ENST00000430889 EFNB3Q15768 340 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 FBXL19-AS1Q494R0 122 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 LCE2DQ5TA82 110 aaPredicted RBP11.43□□□□□ -0.58
HOXC4-202ENST00000430889 OR4A47Q6IF82 309 aa11.43□□□□□ -0.58
HOXC4-202ENST00000430889 ZNF833PQ6ZTB9 187 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms