RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 IGHV2-5P01817 119 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 APOBEC3AP31941 199 aaPredicted RBP13□□□□□ -0.33
TVP23C-203ENST00000428082 COL10A1Q03692 680 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 LCN15Q6UWW0 184 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 OR10P1Q8NGE3 313 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 SLC39A9Q9NUM3 307 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 IGHV3-64DA0A0J9YX35 117 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 UBE2L5PA0A1B0GUS4 154 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 ODAMA1E959 279 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 MAP1LC3B2A6NCE7 125 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 ZFP92A6NM28 416 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 VSTM5A8MXK1 200 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 GZMHP20718 246 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 G6PCP35575 357 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 RAB11AP62491 216 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 ZNF816Q0VGE8 651 aaPredicted RBP13□□□□□ -0.33
TVP23C-203ENST00000428082 FABP9Q0Z7S8 132 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 PRAMEF6Q5VXH4 476 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 MAP1LC3BQ9GZQ8 125 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 RAB9BQ9NP90 201 aa13□□□□□ -0.33
TVP23C-203ENST00000428082 LRBAP50851 2863 aa12.99□□□□□ -0.33
TVP23C-203ENST00000428082 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
TVP23C-203ENST00000428082 RAMP3O60896 148 aa12.99□□□□□ -0.33
TVP23C-203ENST00000428082 RPS10P46783 165 aaKnown RBP12.99□□□□□ -0.33
TVP23C-203ENST00000428082 OR8G2PQ6IF36 304 aa12.99□□□□□ -0.33
TVP23C-203ENST00000428082 OR13D1Q8NGV5 346 aa12.99□□□□□ -0.33
TVP23C-203ENST00000428082 DTD1Q8TEA8 209 aa12.99□□□□□ -0.33
TVP23C-203ENST00000428082 DCHS2Q6V1P9 2916 aa12.99□□□□□ -0.33
TVP23C-203ENST00000428082 C17orf112F2Z3M2 114 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 S1PR2O95136 353 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 PTBP3O95758 552 aaKnown RBP12.98□□□□□ -0.33
TVP23C-203ENST00000428082 PRDX2P32119 198 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 OR2B8PP59922 312 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 RPL30P62888 115 aaKnown RBP12.98□□□□□ -0.33
TVP23C-203ENST00000428082 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
TVP23C-203ENST00000428082 ZNF709Q8N972 641 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 OR2Z1Q8NG97 314 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 LRRC29Q8WV35 223 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 CTDSP1Q9GZU7 261 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 ZNF665Q9H7R5 613 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 UFSP2Q9NUQ7 469 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 USP9YO00507 2555 aaPredicted RBP12.98□□□□□ -0.33
TVP23C-203ENST00000428082 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 CYB5R3P00387 301 aaPredicted RBP12.98□□□□□ -0.33
TVP23C-203ENST00000428082 FBP1P09467 338 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 CFHR2P36980 270 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 ELOBQ15370 118 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 ZNF726P1Q15940 193 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 FAM90A2PQ658T7 463 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 MUC15Q8N387 334 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 LHX4Q969G2 390 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 VSIRQ9H7M9 311 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 JPT1Q9UK76 154 aa12.98□□□□□ -0.33
TVP23C-203ENST00000428082 CHD3Q12873 2000 aaKnown RBP12.97□□□□□ -0.33
TVP23C-203ENST00000428082 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 C17orf98A8MV24 154 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 SPRY3O43610 288 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 ZNF737O75373 536 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 GNB2P62879 340 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 EFNB3Q15768 340 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 OR13A1Q8NGR1 328 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 C5orf30Q96GV9 206 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 SNX22Q96L94 193 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 ACTR3CQ9C0K3 210 aaPredicted RBP12.97□□□□□ -0.33
TVP23C-203ENST00000428082 MANBALQ9NQG1 85 aa12.97□□□□□ -0.33
TVP23C-203ENST00000428082 CACNA1DQ01668 2161 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 CEBPZOSA8MTT3 80 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 CLDN34H7C241 214 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 MGST3O14880 152 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 RBMXL2O75526 392 aaKnown RBP12.96□□□□□ -0.33
TVP23C-203ENST00000428082 GPR12P47775 334 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 PSMB3P49720 205 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 ELLP55199 621 aaPredicted RBP12.96□□□□□ -0.33
TVP23C-203ENST00000428082 VWC2Q2TAL6 325 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 OR2B11Q5JQS5 317 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 ZCCHC24Q8N2G6 241 aaKnown RBP12.96□□□□□ -0.33
TVP23C-203ENST00000428082 AGMATQ9BSE5 352 aa12.96□□□□□ -0.33
TVP23C-203ENST00000428082 ZNF727A8MUV8 499 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 SRRM5B3KS81 715 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 B9A039 149 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 C15orf65H3BRN8 121 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 YPEL1O60688 119 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 HPRT1P00492 218 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 IGHV1-46P01743 117 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 FGF7P21781 194 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 KIR2DS2P43631 304 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.34
TVP23C-203ENST00000428082 CR1LQ2VPA4 569 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 SPRNQ5BIV9 151 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 YPEL2Q96QA6 119 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 ZNF251Q9BRH9 671 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 NCOR1P1Q9H4R4 102 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 SDF2L1Q9HCN8 221 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 CLN8Q9UBY8 286 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 PSG11Q9UQ72 335 aa12.96□□□□□ -0.34
TVP23C-203ENST00000428082 DOPEY2Q9Y3R5 2298 aa12.95□□□□□ -0.34
TVP23C-203ENST00000428082 RAI1Q7Z5J4 1906 aaPredicted RBP12.95□□□□□ -0.34
TVP23C-203ENST00000428082 A0A1W2PPE3 182 aa12.95□□□□□ -0.34
TVP23C-203ENST00000428082 PMS2P5A8MQ11 134 aa12.95□□□□□ -0.34
TVP23C-203ENST00000428082 TMEM250H0YL14 139 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms