RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 SMIM30A4D0T7 59 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 DPPA5A6NC42 116 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 LINC00473A8K010 186 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 CCL24O00175 119 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 RAMP3O60896 148 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 B3GALNT1O75752 331 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 NFYAP23511 347 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-203ENST00000428014 CNTFRP26992 372 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 FCGR2CP31995 323 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 TAS2R31P59538 309 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 VBP1P61758 197 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 NDPQ00604 133 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 DEFA6Q01524 100 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 FXYD3Q14802 87 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 PRSS8Q16651 343 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 HSD17B13Q7Z5P4 300 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-203ENST00000428014 PUSL1Q8N0Z8 303 aaKnown RBP7.12□□□□□ -1.27
SMC1A-203ENST00000428014 MFSD4AQ8N468 514 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 ARRDC1Q8N5I2 433 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 KLHL30-AS1Q8NEE0 82 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 TMEM167AQ8TBQ9 72 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 DPF1Q92782 380 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 ISOC1Q96CN7 298 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 C5orf30Q96GV9 206 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 ZNF486Q96H40 463 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-203ENST00000428014 ATP6V0BQ99437 205 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 SPIN2AQ99865 258 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 SPIN2BQ9BPZ2 258 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 PLEKHA2Q9HB19 425 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 IFT46Q9NQC8 304 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 BET1LQ9NYM9 111 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 CCDC59Q9P031 241 aaKnown RBP7.12□□□□□ -1.27
SMC1A-203ENST00000428014 RSL24D1Q9UHA3 163 aaKnown RBP7.12□□□□□ -1.27
SMC1A-203ENST00000428014 CEPT1Q9Y6K0 416 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 A3GALT2U3KPV4 340 aa7.12□□□□□ -1.27
SMC1A-203ENST00000428014 CMYA5Q8N3K9 4069 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 IGKV1D-13A0A0B4J2D9 117 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 CCDC160A6NGH7 325 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 SH2D7A6NKC9 451 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-203ENST00000428014 CTDSPLO15194 276 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 SLC25A17O43808 307 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 HPRT1P00492 218 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 CA2P00918 260 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 IL6RP08887 468 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-203ENST00000428014 IGKV1-13P0DP09 117 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 PTBP1P26599 531 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMC1A-203ENST00000428014 S100GP29377 79 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 SSBP2P81877 361 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-203ENST00000428014 MRGPRG-AS1Q2M3A8 158 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 C10orf99Q6UWK7 81 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 GLDNQ6ZMI3 551 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-203ENST00000428014 CMTM1Q8IZ96 169 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 GVQW1Q8N7I0 195 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 POC5Q8NA72 575 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 DRAXINQ8NBI3 349 aaPredicted RBP7.11□□□□□ -1.27
SMC1A-203ENST00000428014 OR6F1Q8NGZ6 308 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 MAFIPQ8WZ33 124 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 DGCR14Q96DF8 476 aaKnown RBP7.11□□□□□ -1.27
SMC1A-203ENST00000428014 RHOVQ96L33 236 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 PARP11Q9NR21 331 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 TAS2R8Q9NYW2 309 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 MTFP1Q9UDX5 166 aa7.11□□□□□ -1.27
SMC1A-203ENST00000428014 TRBV9A0A0B4J1U6 114 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 SRRM4A7MD48 611 aaKnown RBP7.1□□□□□ -1.27
SMC1A-203ENST00000428014 NUDT19A8MXV4 375 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 H3BMQ9 156 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 FCN1O00602 326 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 SOX15O60248 233 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 ACTL6BO94805 426 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 KBTBD11O94819 623 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 OR2A4O95047 310 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 CRYZL1O95825 349 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 EIF4EP06730 217 aaKnown RBP7.1□□□□□ -1.27
SMC1A-203ENST00000428014 LGALS1P09382 135 aaKnown RBP7.1□□□□□ -1.27
SMC1A-203ENST00000428014 RPA2P15927 270 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 NQO2P16083 231 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 ELK1P19419 428 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 GNRHRP30968 328 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 TGFBR1P36897 503 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 ECI1P42126 302 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 HERV-K104P61576 105 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 LSM3P62310 102 aaKnown RBP7.1□□□□□ -1.27
SMC1A-203ENST00000428014 ZNF616Q08AN1 781 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 TMEM17Q86X19 198 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 TTC9CQ8N5M4 171 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 OR5H2Q8NGV7 314 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 RAX2Q96IS3 184 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 OR2A7Q96R45 310 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 TINAGL1Q9GZM7 467 aaPredicted RBP7.1□□□□□ -1.27
SMC1A-203ENST00000428014 NAA50Q9GZZ1 169 aaKnown RBP7.1□□□□□ -1.27
SMC1A-203ENST00000428014 TPSG1Q9NRR2 321 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 SIGLEC8Q9NYZ4 499 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 COMMD3Q9UBI1 195 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 FBXO7Q9Y3I1 522 aa7.1□□□□□ -1.27
SMC1A-203ENST00000428014 SORL1Q92673 2214 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 A0A1W2PN81 502 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 FAM223BA6NKX1 122 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 NPIPB5A8MRT5 1133 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 G3V318 75 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 GABARAPH6UMI1 98 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms