RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ETV2O00321 342 aaPredicted RBP13.54□□□□□ -0.24
PKP4-205ENST00000426248 MGST1P10620 155 aaKnown RBP13.54□□□□□ -0.24
PKP4-205ENST00000426248 SLC35B1P78383 322 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 QRFPP83859 136 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 TBC1D26Q86UD7 250 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 WFDC8Q8IUA0 241 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 GATAD1Q8WUU5 269 aa13.54□□□□□ -0.24
PKP4-205ENST00000426248 HS3ST1O14792 307 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 MPPED1O15442 326 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 CLDN1O95832 211 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 ZNF83P51522 516 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 MRGPRDQ8TDS7 321 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 PSENENQ9NZ42 101 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 NAT8BQ9UHF3 227 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 M0R1B8 84 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 CD99P14209 185 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 CFPP27918 469 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 TPTE2P1Q5T6R2 138 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 VWA1Q6PCB0 445 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 NCOR1P1Q9H4R4 102 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 ZNF732B4DXR9 585 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 COX11Q9Y6N1 276 aa13.53□□□□□ -0.24
PKP4-205ENST00000426248 SNURFLB1AK76 121 aa13.52□□□□□ -0.24
PKP4-205ENST00000426248 ZNF133P52736 654 aaPredicted RBP13.52□□□□□ -0.24
PKP4-205ENST00000426248 Q56UQ5 140 aa13.52□□□□□ -0.24
PKP4-205ENST00000426248 RNF138Q8WVD3 245 aa13.52□□□□□ -0.24
PKP4-205ENST00000426248 ARL2-SNX15V9GYD0 113 aa13.52□□□□□ -0.24
PKP4-205ENST00000426248 K7EM74 188 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 TIMM8AO60220 97 aaPredicted RBP13.52□□□□□ -0.25
PKP4-205ENST00000426248 DHRS3O75911 302 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 UCNP55089 124 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 SNAI3Q3KNW1 292 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 OCIAD2Q56VL3 154 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 COA6Q5JTJ3 125 aaKnown RBP13.52□□□□□ -0.25
PKP4-205ENST00000426248 NEIL1Q96FI4 390 aaPredicted RBP13.52□□□□□ -0.25
PKP4-205ENST00000426248 HIPK2Q9H2X6 1198 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 CST9LQ9H4G1 147 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 C1QTNF9BB2RNN3 333 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 SH2D1BO14796 132 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 ZNF253O75346 499 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 GRPP07492 148 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 SRP14P37108 136 aaKnown RBP13.52□□□□□ -0.25
PKP4-205ENST00000426248 C10orf128Q5T292 105 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 MDP1Q86V88 176 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 OR10V1Q8NGI7 309 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 TAAR6Q96RI8 345 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 P2RX4Q99571 388 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 SERTAD4Q9NUC0 356 aa13.52□□□□□ -0.25
PKP4-205ENST00000426248 TBL2Q9Y4P3 447 aaKnown RBP13.52□□□□□ -0.25
PKP4-205ENST00000426248 ODAMA1E959 279 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 SAXO1Q8IYX7 474 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 FAM206AQ9NX38 181 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 MSRB2Q9Y3D2 182 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 C11orf94C9JXX5 98 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 GOSR1O95249 250 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 APOBEC3DQ96AK3 386 aaPredicted RBP13.51□□□□□ -0.25
PKP4-205ENST00000426248 MRPL18Q9H0U6 180 aaKnown RBP13.51□□□□□ -0.25
PKP4-205ENST00000426248 AHRRA9YTQ3 701 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 WDR1O75083 606 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 GSX1Q9H4S2 264 aaPredicted RBP13.51□□□□□ -0.25
PKP4-205ENST00000426248 CLN8Q9UBY8 286 aa13.51□□□□□ -0.25
PKP4-205ENST00000426248 CEACAM18A8MTB9 384 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 ALKBH6Q3KRA9 238 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 C9orf106Q8NAJ2 232 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 FGFBP3Q8TAT2 258 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 APOA2P02652 100 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 NTF4P34130 210 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 KCNMB1Q16558 191 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 STUMQ69YW2 141 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 FAM19A2Q8N3H0 131 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 OR2D3Q8NGH3 330 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 NINJ1Q92982 152 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 WISP2O76076 250 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 KRASP01116 189 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 HLA-DRB5Q30154 266 aa13.5□□□□□ -0.25
PKP4-205ENST00000426248 SIRPB1O00241 398 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 EDDM3AQ14507 147 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 MKXQ8IYA7 352 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 OR5D13Q8NGL4 314 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 LRP5LA4QPB2 252 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 SMPD2O60906 423 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 NDUFB4O95168 129 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 C1QTNF9P0C862 333 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 DEFA4P12838 97 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 MRPL52Q86TS9 123 aaKnown RBP13.49□□□□□ -0.25
PKP4-205ENST00000426248 NIT1Q86X76 327 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 MSI2Q96DH6 328 aaKnown RBP13.49□□□□□ -0.25
PKP4-205ENST00000426248 A0A1W2PPV4 95 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 PPYP01298 95 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 TCL1AP56279 114 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 GAPTQ8N292 157 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 PLSCR2Q9NRY7 297 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 ABCA2Q9BZC7 2435 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 HYPMO75409 117 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 NGFP01138 241 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 TBR1Q16650 682 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 CXorf67Q86X51 503 aaPredicted RBP13.49□□□□□ -0.25
PKP4-205ENST00000426248 DEFB108BQ8NET1 73 aa13.49□□□□□ -0.25
PKP4-205ENST00000426248 OR10G4Q8NGN3 311 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms