RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 F2RP25116 425 aa19.33■□□□□ 0.69
VEGFA-209ENST00000425836 CD300LFQ8TDQ1 290 aa19.33■□□□□ 0.69
VEGFA-209ENST00000425836 MPPED1O15442 326 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 VMA21Q3ZAQ7 101 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 VKORC1L1Q8N0U8 176 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 RTBDNQ9BSG5 229 aaPredicted RBP19.32■□□□□ 0.68
VEGFA-209ENST00000425836 CCDC32Q9BV29 185 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 LINC00854A0A1B0GVQ3 168 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 KCNAB3O43448 404 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 HPRT1P00492 218 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 SRSF4Q08170 494 aaKnown RBP19.32■□□□□ 0.68
VEGFA-209ENST00000425836 ZNF585BQ52M93 769 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 PPP1R27Q86WC6 154 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 TCTEX1D1Q8N7M0 179 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 TEX45Q8NA69 505 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 WIPF2Q8TF74 440 aaPredicted RBP19.32■□□□□ 0.68
VEGFA-209ENST00000425836 NOL4LQ96MY1 436 aaPredicted RBP19.32■□□□□ 0.68
VEGFA-209ENST00000425836 C5orf66Q9H5L9 145 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 LINC00527Q9UJ94 153 aa19.32■□□□□ 0.68
VEGFA-209ENST00000425836 SAA1P0DJI8 122 aaPredicted RBP19.31■□□□□ 0.68
VEGFA-209ENST00000425836 CD40LGP29965 261 aa19.31■□□□□ 0.68
VEGFA-209ENST00000425836 CX3CL1P78423 397 aa19.31■□□□□ 0.68
VEGFA-209ENST00000425836 PJVKQ0ZLH3 352 aa19.31■□□□□ 0.68
VEGFA-209ENST00000425836 FOXRED2Q8IWF2 684 aa19.31■□□□□ 0.68
VEGFA-209ENST00000425836 WDR12Q9GZL7 423 aaKnown RBP19.31■□□□□ 0.68
VEGFA-209ENST00000425836 OR51J1Q9H342 316 aa19.31■□□□□ 0.68
VEGFA-209ENST00000425836 PLEKHA2Q9HB19 425 aa19.31■□□□□ 0.68
VEGFA-209ENST00000425836 COPZ2Q9P299 210 aa19.31■□□□□ 0.68
VEGFA-209ENST00000425836 S1PR2O95136 353 aa19.3■□□□□ 0.68
VEGFA-209ENST00000425836 CA2P00918 260 aa19.3■□□□□ 0.68
VEGFA-209ENST00000425836 HRASP01112 189 aa19.3■□□□□ 0.68
VEGFA-209ENST00000425836 ZNF846Q147U1 533 aa19.3■□□□□ 0.68
VEGFA-209ENST00000425836 MRGPRG-AS1Q2M3A8 158 aa19.3■□□□□ 0.68
VEGFA-209ENST00000425836 ZNF562Q6V9R5 426 aa19.3■□□□□ 0.68
VEGFA-209ENST00000425836 RHOVQ96L33 236 aa19.3■□□□□ 0.68
VEGFA-209ENST00000425836 C14orf166Q9Y224 244 aaKnown RBP19.3■□□□□ 0.68
VEGFA-209ENST00000425836 VSIG4Q9Y279 399 aa19.3■□□□□ 0.68
VEGFA-209ENST00000425836 AP4M1O00189 453 aa19.29■□□□□ 0.68
VEGFA-209ENST00000425836 LPAR6P43657 344 aa19.29■□□□□ 0.68
VEGFA-209ENST00000425836 TAS2R31P59538 309 aa19.29■□□□□ 0.68
VEGFA-209ENST00000425836 NDPQ00604 133 aa19.29■□□□□ 0.68
VEGFA-209ENST00000425836 CENPVQ7Z7K6 275 aaPredicted RBP19.29■□□□□ 0.68
VEGFA-209ENST00000425836 STPG2Q8N412 459 aa19.29■□□□□ 0.68
VEGFA-209ENST00000425836 CCDC71LQ8N9Z2 235 aa19.29■□□□□ 0.68
VEGFA-209ENST00000425836 SCGB3A2Q96PL1 93 aa19.29■□□□□ 0.68
VEGFA-209ENST00000425836 FAM212BQ9NTI7 297 aaPredicted RBP19.29■□□□□ 0.68
VEGFA-209ENST00000425836 NAP1L6A6NFF2 107 aa19.28■□□□□ 0.68
VEGFA-209ENST00000425836 IGF1P05019 195 aa19.28■□□□□ 0.68
VEGFA-209ENST00000425836 PUSL1Q8N0Z8 303 aaKnown RBP19.28■□□□□ 0.68
VEGFA-209ENST00000425836 DNHD1Q96M86 4753 aa19.28■□□□□ 0.68
VEGFA-209ENST00000425836 ATP6V0E1O15342 81 aa19.27■□□□□ 0.68
VEGFA-209ENST00000425836 NQO2P16083 231 aa19.27■□□□□ 0.68
VEGFA-209ENST00000425836 SSBP2P81877 361 aaPredicted RBP19.27■□□□□ 0.68
VEGFA-209ENST00000425836 PRSS8Q16651 343 aa19.27■□□□□ 0.68
VEGFA-209ENST00000425836 SSX9Q7RTT3 188 aa19.27■□□□□ 0.68
VEGFA-209ENST00000425836 CHPT1Q8WUD6 406 aa19.27■□□□□ 0.68
VEGFA-209ENST00000425836 AIFM2Q9BRQ8 373 aa19.27■□□□□ 0.68
VEGFA-209ENST00000425836 PARP11Q9NR21 331 aa19.27■□□□□ 0.68
VEGFA-209ENST00000425836 COMMD9Q9P000 198 aa19.27■□□□□ 0.68
VEGFA-209ENST00000425836 C3orf85A0A1B0GTC6 90 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 H0Y980 276 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 ARPC1BO15143 372 aaKnown RBP19.27■□□□□ 0.67
VEGFA-209ENST00000425836 PLA2G10O15496 165 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 OR2A4O95047 310 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 POU2AF1Q16633 256 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 SHISA2Q6UWI4 295 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 C10orf99Q6UWK7 81 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 VSTM2AQ8TAG5 236 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 OR2A7Q96R45 310 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 TP53RKQ96S44 253 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 CITED1Q99966 193 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 C7orf50Q9BRJ6 194 aaKnown RBP19.27■□□□□ 0.67
VEGFA-209ENST00000425836 ZNF580Q9UK33 172 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 FBXO7Q9Y3I1 522 aa19.27■□□□□ 0.67
VEGFA-209ENST00000425836 CENPXA8MT69 81 aa19.26■□□□□ 0.67
VEGFA-209ENST00000425836 EGR2P11161 476 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-209ENST00000425836 CCR6P51684 374 aa19.26■□□□□ 0.67
VEGFA-209ENST00000425836 FXYD3Q14802 87 aa19.26■□□□□ 0.67
VEGFA-209ENST00000425836 ZNF329Q86UD4 541 aa19.26■□□□□ 0.67
VEGFA-209ENST00000425836 ADAD2Q8NCV1 583 aaKnown RBP19.26■□□□□ 0.67
VEGFA-209ENST00000425836 OR5AU1Q8NGC0 362 aa19.26■□□□□ 0.67
VEGFA-209ENST00000425836 R3HDM4Q96D70 268 aa19.26■□□□□ 0.67
VEGFA-209ENST00000425836 SLC25A21Q9BQT8 299 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-209ENST00000425836 ZNF430Q9H8G1 570 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-209ENST00000425836 TENM1Q9UKZ4 2725 aa19.26■□□□□ 0.67
VEGFA-209ENST00000425836 PSMB11A5LHX3 300 aa19.25■□□□□ 0.67
VEGFA-209ENST00000425836 KBTBD11O94819 623 aa19.25■□□□□ 0.67
VEGFA-209ENST00000425836 GNB1P62873 340 aa19.25■□□□□ 0.67
VEGFA-209ENST00000425836 OR4A47Q6IF82 309 aa19.25■□□□□ 0.67
VEGFA-209ENST00000425836 C11orf44Q8N8P7 122 aa19.25■□□□□ 0.67
VEGFA-209ENST00000425836 TMEM167AQ8TBQ9 72 aa19.25■□□□□ 0.67
VEGFA-209ENST00000425836 TMEM230Q96A57 120 aa19.25■□□□□ 0.67
VEGFA-209ENST00000425836 SERPINE2P07093 398 aa19.24■□□□□ 0.67
VEGFA-209ENST00000425836 RPA2P15927 270 aa19.24■□□□□ 0.67
VEGFA-209ENST00000425836 BTCP35070 178 aa19.24■□□□□ 0.67
VEGFA-209ENST00000425836 SP6Q3SY56 376 aa19.24■□□□□ 0.67
VEGFA-209ENST00000425836 ARPC1AQ92747 370 aa19.24■□□□□ 0.67
VEGFA-209ENST00000425836 FAM103A1Q9BTL3 118 aaKnown RBP19.24■□□□□ 0.67
VEGFA-209ENST00000425836 NAA60Q9H7X0 242 aa19.24■□□□□ 0.67
VEGFA-209ENST00000425836 BET1LQ9NYM9 111 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms