RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZPBPQ9BS86 351 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 ATG101Q9BSB4 218 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 DDA1Q9BW61 102 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 PCSK5Q92824 1860 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF705FA8MVS1 300 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 MLNRO43193 412 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF705DP0CH99 300 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF705BP0CI00 300 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 CD46P15529 392 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 GPR12P47775 334 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 FOXF2Q12947 444 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 ZNF766Q5HY98 468 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 COA6Q5JTJ3 125 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 MIC13Q5XKP0 118 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 SLC35E4Q6ICL7 350 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 LRP11Q86VZ4 500 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 UBALD2Q8IYN6 164 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 OR4A16Q8NH70 328 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 SSMEM1Q8WWF3 244 aa6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 NOL4LQ96MY1 436 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 MRPL37Q9BZE1 423 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-202ENST00000425518 A0A1W2PNU3 283 aaPredicted RBP6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 MKRN2OSH3BPM6 223 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 VENTXO95231 258 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 KITLGP21583 273 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 GUCD1Q96NT3 240 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 NDUFAF3Q9BU61 184 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 ARRDC1-AS1Q9H2J1 176 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 FKBP11Q9NYL4 201 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 MDFIC2A0A1B0GVS7 189 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 GRIFINA4D1Z8 144 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 F6UZH7 168 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 M0R1X1 148 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 AQP7O14520 342 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 RRHO14718 337 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 SPINT2O43291 252 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 NUPR1O60356 82 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 ARL14EPLP0DKL9 152 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 IQCJQ1A5X6 159 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 ACP7Q6ZNF0 438 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 C11orf53Q8IXP5 236 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 HINT2Q9BX68 163 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 IQCF6A8MYZ5 107 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 RBFOX2O43251 390 aaKnown RBP eCLIP6.27□□□□□ -1.413e-7■□□□□ 8.1
SMARCC1-202ENST00000425518 PDE6DO43924 150 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 GCH1P30793 250 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 C1orf210Q8IVY1 113 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 TRIB1Q96RU8 372 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 IMMP2LQ96T52 175 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 SPRY4Q9C004 299 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 CBLN4Q9NTU7 201 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 WDR83OSQ9Y284 106 aa6.27□□□□□ -1.41
SMARCC1-202ENST00000425518 TRAV3A0A0B4J244 114 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 EREGO14944 169 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 TDGF1P13385 188 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 HOXC12P31275 282 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 GABRA6Q16445 453 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 RPL39P5Q59GN2 51 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 MS4A10Q96PG2 267 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 HSD17B10Q99714 261 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 CACNA1HO95180 2353 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 MUC6Q6W4X9 2439 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 SCO2A0A1W2PP80 73 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 TMEM210A6NLX4 147 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 TCAPO15273 167 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 SELLP14151 372 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 CCKARP32238 428 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 PDLIM4P50479 330 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 ZNF90Q03938 601 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 EIF4EBP1Q13541 118 aaPredicted RBP6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 WDR82Q6UXN9 313 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 GBGT1Q8N5D6 347 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 OCC1Q8TAD7 63 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 SFRP2Q96HF1 295 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 C2orf88Q9BSF0 95 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 CXXC4Q9H2H0 198 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 MS4A5Q9H3V2 200 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 ZDHHC11Q9H8X9 412 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 RYDENQ9NUL5 291 aaKnown RBP6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 PXMP4Q9Y6I8 212 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 BDP1A6H8Y1 2624 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 CEP250Q9BV73 2442 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 SLC17A3O00476 420 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 WISP2O76076 250 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 TYMSP04818 313 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 G0S2P27469 103 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 LCN2P80188 198 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 TEX38Q6PEX7 206 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 TREML4Q6UXN2 200 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 LRRC29Q8WV35 223 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 LEAP2Q969E1 77 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
SMARCC1-202ENST00000425518 TRBV20OR9-2A0A075B6H5 130 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 IGHV3OR15-7A0A075B7D8 119 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 PROP1O75360 226 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 TNFSF15O95150 251 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 CBLN1P23435 193 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 PRDX2P32119 198 aa6.25□□□□□ -1.41
SMARCC1-202ENST00000425518 DUTP33316 252 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms