RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 C2orf76Q3KRA6 126 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 MARC2Q969Z3 335 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 EEF1AKMT3Q96AZ1 226 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 FAM3DQ96BQ1 224 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CCDC90BQ9GZT6 254 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OR51E2Q9H255 320 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 THYN1Q9P016 225 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ZNF230Q9UIE0 474 aaPredicted RBP9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ADAM30Q9UKF2 790 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 AK6Q9Y3D8 172 aaKnown RBP9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 V9GY05 133 aa9.26□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TRBV6-7A0A0A0MS04 114 aa9.25□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TRBV9A0A0B4J1U6 114 aa9.25□□□□□ -0.93
HLA-DQB3-203ENST00000425319 BMI1P35226 326 aa9.25□□□□□ -0.93
HLA-DQB3-203ENST00000425319 DEFA5Q01523 94 aa9.25□□□□□ -0.93
HLA-DQB3-203ENST00000425319 LINC00476Q8WZB0 136 aa9.25□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TMEM203Q969S6 136 aa9.25□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CXorf58Q96LI9 332 aa9.25□□□□□ -0.93
HLA-DQB3-203ENST00000425319 C6orf62Q9GZU0 229 aaPredicted RBP9.25□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TRBV7-1A0A0A6YYK4 115 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 SRRM4A7MD48 611 aaKnown RBP9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 EBAG9O00559 213 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 FCGR3BO75015 233 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 HRASP01112 189 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 PRH1P02810 166 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 HSMCR30P0CW71 290 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CD37P11049 281 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 MYOD1P15172 320 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 DUTP33316 252 aaKnown RBP9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 PMS2P11Q13670 270 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 INSL4Q14641 139 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 IGSF11Q5DX21 431 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 LAMTOR1Q6IAA8 161 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 STPG3Q8N7X2 389 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 UXS1Q8NBZ7 420 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OR1L6Q8NGR2 347 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 WDR89Q96FK6 387 aaPredicted RBP9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 FYTTD1Q96QD9 318 aaKnown RBP9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OR2A7Q96R45 310 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CABLES2Q9BTV7 478 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ZC4H2Q9NQZ6 224 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TP53TG1Q9Y2A0 90 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TPRKBQ9Y3C4 175 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 UFC1Q9Y3C8 167 aa9.24□□□□□ -0.93
HLA-DQB3-203ENST00000425319 A0A0A6YYD4 124 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 IGKV1-6A0A0C4DH72 117 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 SPRY2O43597 315 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 FCGR3AP08637 254 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CRHBPP24387 322 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 RPL27AP46776 148 aaKnown RBP9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 RCN1Q15293 331 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 LIPKQ5VXJ0 399 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CEMP1Q6PRD7 247 aaPredicted RBP9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CLEC19AQ6UXS0 136 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 IDO2Q6ZQW0 420 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 Q6ZWC4 215 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 KCTD9Q7L273 389 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OR2C3Q8N628 320 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ZNF645Q8N7E2 425 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OR10R2Q8NGX6 335 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OR4S2Q8NH73 311 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 HSD17B10Q99714 261 aaKnown RBP9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 KCNK15Q9H427 330 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ZNF430Q9H8G1 570 aaPredicted RBP9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 ACOT13Q9NPJ3 140 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 SLC2A9Q9NRM0 540 aa9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 MRPL27Q9P0M9 148 aaKnown RBP9.23□□□□□ -0.93
HLA-DQB3-203ENST00000425319 A0A075B6Q4 140 aa9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 NPIPB5A8MRT5 1133 aa9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 PPP5D1E7EU14 171 aa9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 SCAF4O95104 1147 aaKnown RBP9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 SAA1P0DJI8 122 aaPredicted RBP9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 CALRP27797 417 aaKnown RBP9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 SSBP2P81877 361 aaPredicted RBP9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 TM4SF20Q53R12 229 aa9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 WFDC3Q8IUB2 231 aa9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 OVOL2Q9BRP0 275 aa9.22□□□□□ -0.93
HLA-DQB3-203ENST00000425319 J3QRK9 145 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 IFNA4P05014 189 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CLEC3BP05452 202 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ATF4P18848 351 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 GALP22466 123 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 MYL9P24844 172 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ELLP55199 621 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 TNFRSF9Q07011 255 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 ZNF585BQ52M93 769 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 PLAC9Q5JTB6 97 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 PLET1Q6UQ28 207 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 H1FOOQ8IZA3 346 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CENPSQ8N2Z9 138 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 CYYR1Q96J86 154 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 OR2W1Q9Y3N9 320 aa9.21□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HMX3A6NHT5 357 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 FOXI3A8MTJ6 420 aaPredicted RBP9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 SCGNO76038 276 aa9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HLA-AP01891 365 aaKnown RBP9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 HIST1H1DP16402 221 aaKnown RBP9.2□□□□□ -0.94
HLA-DQB3-203ENST00000425319 GNB3P16520 340 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms