RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 MEOX1P50221 254 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 ATP5IP56385 69 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-204ENST00000424143 DCAF10Q5QP82 559 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 CMTM2Q8TAZ6 248 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 UBALD1Q8TB05 177 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 GGTLC1Q9BX51 225 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 NPVFQ9HCQ7 196 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 SLC25A10Q9UBX3 287 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-204ENST00000424143 JPT1Q9UK76 154 aa12.66□□□□□ -0.38
C9orf3-204ENST00000424143 GTF3C1Q12789 2109 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 RANBP2P49792 3224 aaKnown RBP12.65□□□□□ -0.38
C9orf3-204ENST00000424143 USF3Q68DE3 2245 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 MMP23AO75900 390 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 C1QTNF9P0C862 333 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
C9orf3-204ENST00000424143 TDGF1P3P51864 188 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 AESQ08117 197 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 GAGE1Q13065 139 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 SMIM21Q3B7S5 101 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 CORO2AQ92828 525 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 HES7Q9BYE0 225 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 OR51B6Q9H340 312 aa12.65□□□□□ -0.38
C9orf3-204ENST00000424143 A8MXE2 369 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 MT-ND6P03923 174 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 GRPP07492 148 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 OR9G9P0C7N8 305 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 GCH1P30793 250 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 RHOBP62745 196 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 TMEM256Q8N2U0 113 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-204ENST00000424143 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 KLF14Q8TD94 323 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-204ENST00000424143 UHRF2Q96PU4 802 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 MGST2Q99735 147 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 GNB1LQ9BYB4 327 aa12.64□□□□□ -0.39
C9orf3-204ENST00000424143 TRBV20OR9-2A0A075B6H5 130 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 SAA2-SAA4A0A096LPE2 208 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 TRAV38-1A0A0B4J264 116 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 GFRA3O60609 400 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
C9orf3-204ENST00000424143 CRYAAP02489 173 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 REG1AP05451 166 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 GCHFRP30047 84 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 ADMP35318 185 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 LGALS4P56470 323 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 RAB31Q13636 194 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 WDR82Q6UXN9 313 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 ZNF114Q8NC26 417 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 OCC1Q8TAD7 63 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 MRGPRDQ8TDS7 321 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 OPN3Q9H1Y3 402 aaPredicted RBP12.63□□□□□ -0.39
C9orf3-204ENST00000424143 ZDHHC11Q9H8X9 412 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 RAB9BQ9NP90 201 aa12.63□□□□□ -0.39
C9orf3-204ENST00000424143 F2RL2O00254 374 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 CD46P15529 392 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 CFHR2P36980 270 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 GPR12P47775 334 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 GABRA2P47869 451 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 EDDM3BP56851 147 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 ERVK-16P61578 105 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 RELBQ01201 579 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 PRSS8Q16651 343 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 ALKBH6Q3KRA9 238 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 PNKDQ8N490 385 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-204ENST00000424143 OR13A1Q8NGR1 328 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-204ENST00000424143 PPP1R35Q8TAP8 253 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 TMEM68Q96MH6 324 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 C12orf49Q9H741 205 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 PATE3B3GLJ2 98 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 C9orf172C9J069 976 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 IGKV3-15P01624 115 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 TPTE2P1Q5T6R2 138 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 PRAMEF5Q5TYX0 476 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 PRAMEF6Q5VXH4 476 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 WDR73Q6P4I2 378 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 FER1L6-AS2Q96M78 137 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 TBX15Q96SF7 602 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 DERL1Q9BUN8 251 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 MS4A5Q9H3V2 200 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 OBP2BQ9NPH6 170 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-204ENST00000424143 PSG11Q9UQ72 335 aa12.62□□□□□ -0.39
C9orf3-204ENST00000424143 TRGV5A0A0B4J1U4 118 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 PROP1O75360 226 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 CELA3BP08861 270 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 CRISP2P16562 243 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 CEBPDP49716 269 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-204ENST00000424143 UBE2G2P60604 165 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 ZNF90Q03938 601 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 GUSBP1Q15486 140 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 POU2AF1Q16633 256 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 RTL8BQ17RB0 113 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms