RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 OR4S2Q8NH73 311 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 ZNF251Q9BRH9 671 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 NGBQ9NPG2 151 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 MLXQ9UH92 298 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 TRAV38-1A0A0B4J264 116 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 A0A1W2PPE3 182 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 NKX6-3A6NJ46 265 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 THBS3P49746 956 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 LCN15Q6UWW0 184 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 SSX7Q7RTT5 188 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 OR10G4Q8NGN3 311 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 VKORC1Q9BQB6 163 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 EGLN1Q9GZT9 426 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 DOCK11Q5JSL3 2073 aa11.36□□□□□ -0.59
CDCA3-202ENST00000422785 hADV38S2A0JD32 116 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 C15orf62A8K5M9 175 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 TMPRSS2O15393 492 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 ELLP55199 621 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-202ENST00000422785 RELBQ01201 579 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 TLE1Q04724 770 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 VKORC1L1Q8N0U8 176 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 ZCCHC24Q8N2G6 241 aaKnown RBP11.35□□□□□ -0.59
CDCA3-202ENST00000422785 ADTRPQ96IZ2 230 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 GNG13Q9P2W3 67 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 PUS1Q9Y606 427 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDCA3-202ENST00000422785 HCFC1P51610 2035 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 HOXA1P49639 335 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-202ENST00000422785 MEOX2P50222 304 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 TMPRSS3P57727 454 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 MRPS11P82912 194 aaKnown RBP11.35□□□□□ -0.59
CDCA3-202ENST00000422785 AVPI1Q5T686 147 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 C1orf87Q8N0U7 546 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 CYB561D1Q8N8Q1 229 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 SAP30LQ9HAJ7 183 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 CISD1Q9NZ45 108 aaKnown RBP11.35□□□□□ -0.59
CDCA3-202ENST00000422785 RPUSD1Q9UJJ7 312 aaKnown RBP11.35□□□□□ -0.59
CDCA3-202ENST00000422785 LINC00312Q9Y6C7 94 aa11.35□□□□□ -0.59
CDCA3-202ENST00000422785 ARG1P05089 322 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 CRYBA1P05813 215 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 MDKP21741 143 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-202ENST00000422785 FGF7P21781 194 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 RPP30P78346 268 aaKnown RBP11.34□□□□□ -0.59
CDCA3-202ENST00000422785 ZNF429Q86V71 674 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 LYG1Q8N1E2 194 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 RPP25LQ8N5L8 163 aaKnown RBP11.34□□□□□ -0.59
CDCA3-202ENST00000422785 PCNX1Q96RV3 2341 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 MAP1LC3B2A6NCE7 125 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 MBP02144 154 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 FBP1P09467 338 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 BCL2P10415 239 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 NDUFB7P17568 137 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 MEF2CQ06413 473 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-202ENST00000422785 PMS2P11Q13670 270 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 SLC16A13Q7RTY0 426 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 MAP1LC3BQ9GZQ8 125 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-202ENST00000422785 DCHS1Q96JQ0 3298 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 PTPRQQ9UMZ3 2332 aa11.34□□□□□ -0.59
CDCA3-202ENST00000422785 H3BQ15 152 aa11.33□□□□□ -0.59
CDCA3-202ENST00000422785 TMEM178BH3BS89 294 aa11.33□□□□□ -0.59
CDCA3-202ENST00000422785 MMP23AO75900 390 aa11.33□□□□□ -0.59
CDCA3-202ENST00000422785 FABP1P07148 127 aa11.33□□□□□ -0.59
CDCA3-202ENST00000422785 FOLR2P14207 255 aa11.33□□□□□ -0.59
CDCA3-202ENST00000422785 FGF8P55075 233 aaPredicted RBP11.33□□□□□ -0.59
CDCA3-202ENST00000422785 RPS16P62249 146 aaKnown RBP11.33□□□□□ -0.59
CDCA3-202ENST00000422785 ACSM6Q6P461 480 aa11.33□□□□□ -0.59
CDCA3-202ENST00000422785 SLC25A48Q6ZT89 311 aaKnown RBP11.33□□□□□ -0.59
CDCA3-202ENST00000422785 ZNF383Q8NA42 475 aa11.33□□□□□ -0.59
CDCA3-202ENST00000422785 NPCDR1Q9BY65 106 aa11.33□□□□□ -0.59
CDCA3-202ENST00000422785 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 SHISA9B4DS77 424 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 ATXN7O15265 892 aaPredicted RBP11.33□□□□□ -0.6
CDCA3-202ENST00000422785 IGKV1D-33P01593 117 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 IGKV1-33P01594 117 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 DAOP14920 347 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 VDAC2P45880 294 aaPredicted RBP11.33□□□□□ -0.6
CDCA3-202ENST00000422785 CEBPGP53567 150 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 S100A12P80511 92 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 TFF3Q07654 80 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 C21orf62-AS1Q17RA5 79 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 NCMAPQ5T1S8 102 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 OR10A7Q8NGE5 316 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 SLC39A9Q9NUM3 307 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 PPIAL4EA0A075B759 164 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 ZFP92A6NM28 416 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 PPIAL4DF5H284 164 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 MT-ND4LP03901 98 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 RD3LP0DJH9 198 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 PPIAL4FP0DN26 164 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 GNG10P50151 68 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 ZNF709Q8N972 641 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 C2CD4CQ8TF44 421 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 RNASE6Q93091 150 aaKnown RBP11.33□□□□□ -0.6
CDCA3-202ENST00000422785 HIST1H2BAQ96A08 127 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 RHOVQ96L33 236 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 GAL3ST2Q9H3Q3 398 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 HEYLQ9NQ87 328 aaPredicted RBP11.33□□□□□ -0.6
CDCA3-202ENST00000422785 PPIAL4AQ9Y536 164 aa11.33□□□□□ -0.6
CDCA3-202ENST00000422785 TLN1Q9Y490 2541 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms