RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 CITED4Q96RK1 184 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 SPIN2AQ99865 258 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 SPIN2BQ9BPZ2 258 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 ZNF430Q9H8G1 570 aaPredicted RBP8.82□□□□□ -1
SQSTM1-203ENST00000422245 C19orf73Q9NVV2 129 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 PRELID3BQ9Y3B1 194 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 OR2W1Q9Y3N9 320 aa8.82□□□□□ -1
SQSTM1-203ENST00000422245 SMIM30A4D0T7 59 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 FCGR3BO75015 233 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 TUSC2O75896 110 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 TRBV12-3P01733 135 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 HLA-DQB1P01920 261 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 APELAP0DMC3 54 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 GNG2P59768 71 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 RHOGP84095 191 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 EXOSC2Q13868 293 aaKnown RBP8.81□□□□□ -1
SQSTM1-203ENST00000422245 FAM209BQ5JX69 171 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 CNIH2Q6PI25 160 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 GTSCR1Q86UQ5 136 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 TPRA1Q86W33 373 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 OR2K2Q8NGT1 345 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 OR4S2Q8NH73 311 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 VSTM2AQ8TAG5 236 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 NUDCD2Q8WVJ2 157 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 ST6GALNAC5Q9BVH7 336 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 TXNL4BQ9NX01 149 aaKnown RBP8.81□□□□□ -1
SQSTM1-203ENST00000422245 PEMTQ9UBM1 199 aa8.81□□□□□ -1
SQSTM1-203ENST00000422245 ELF5Q9UKW6 265 aaPredicted RBP8.81□□□□□ -1
SQSTM1-203ENST00000422245 RBMX2Q9Y388 322 aaKnown RBP8.81□□□□□ -1
SQSTM1-203ENST00000422245 TRBV9A0A0B4J1U6 114 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 TMEM235A6NFC5 223 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 AIREO43918 545 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 RBMXL2O75526 392 aaKnown RBP8.8□□□□□ -1
SQSTM1-203ENST00000422245 CSN3P07498 182 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 LYL1P12980 280 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 NFYAP23511 347 aaPredicted RBP8.8□□□□□ -1
SQSTM1-203ENST00000422245 ATP5G2Q06055 141 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 SFXN4Q6P4A7 337 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 SLC25A42Q86VD7 318 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 NECAP1Q8NC96 275 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 LGALS14Q8TCE9 139 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 ISOC1Q96CN7 298 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 HSD17B10Q99714 261 aaKnown RBP8.8□□□□□ -1
SQSTM1-203ENST00000422245 SPATA25Q9BR10 227 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 THAP7Q9BT49 309 aaPredicted RBP8.8□□□□□ -1
SQSTM1-203ENST00000422245 DCUN1D5Q9BTE7 237 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 Q9H521 79 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 PALMDQ9NP74 551 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 AKIP1Q9NQ31 210 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 DAPK2Q9UIK4 370 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 DNAH7Q8WXX0 4024 aa8.8□□□□□ -1
SQSTM1-203ENST00000422245 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.79□□□□□ -1
SQSTM1-203ENST00000422245 IGKV1D-13A0A0B4J2D9 117 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 J3QRK9 145 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 BMPR1BO00238 502 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 IGKV1-13P0DP09 117 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 SCAND1P57086 179 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 ZNF45Q02386 682 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 OR2B11Q5JQS5 317 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 C10orf55Q5SWW7 151 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 LAX1Q8IWV1 398 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 SPARTQ8N0X7 666 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 TTC9CQ8N5M4 171 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 TCTEX1D2Q8WW35 142 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 RHBDL2Q9NX52 303 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 ANXA10Q9UJ72 324 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 ADAM30Q9UKF2 790 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 SSR3Q9UNL2 185 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 ZNF257Q9Y2Q1 563 aa8.79□□□□□ -1
SQSTM1-203ENST00000422245 RRP15Q9Y3B9 282 aaKnown RBP8.79□□□□□ -1
SQSTM1-203ENST00000422245 RYR2Q92736 4967 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 SSX5O60225 188 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 KBTBD11O94819 623 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 IGLV2-14P01704 120 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 PRH1P02810 166 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 MAS1LP35410 378 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 KIR2DS2P43631 304 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 RPL30P62888 115 aaKnown RBP8.78□□□□□ -1
SQSTM1-203ENST00000422245 MSMO1Q15800 293 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 C15orf32Q32M92 178 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 ZNF66Q6ZN08 573 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 TMEM167AQ8TBQ9 72 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 OR2A7Q96R45 310 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 YTHDF1Q9BYJ9 559 aaKnown RBP8.78□□□□□ -1
SQSTM1-203ENST00000422245 OR51E2Q9H255 320 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 ETV7Q9Y603 341 aa8.78□□□□□ -1
SQSTM1-203ENST00000422245 DPPA5A6NC42 116 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 NPIPB5A8MRT5 1133 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 TEX22C9J3V5 150 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 RPL27AP46776 148 aaKnown RBP8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 ARPC4P59998 168 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 EIF4EBP1Q13541 118 aaPredicted RBP8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 VKORC1L1Q8N0U8 176 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 PUSL1Q8N0Z8 303 aaKnown RBP8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 KCTD12Q96CX2 325 aaKnown RBP8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 TUBA4BQ9H853 241 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 EDA2RQ9HAV5 297 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 TAS2R8Q9NYW2 309 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 SPATA2Q9UM82 520 aa8.77□□□□□ -1.01
SQSTM1-203ENST00000422245 DYNC2H1Q8NCM8 4307 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms