RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 HOXC5Q00444 222 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 IFITM2Q01629 132 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 FAM201AQ5SY85 155 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 ALKAL1Q6UXT8 129 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 GPHB5Q86YW7 130 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 DEFB125Q8N687 156 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 OR2T4Q8NH00 348 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 OR11H2Q8NH07 326 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 LHFPL5Q8TAF8 219 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 RPS4Y2Q8TD47 263 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 SLC35B4Q969S0 331 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 NMNAT3Q96T66 252 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 C9orf16Q9BUW7 83 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 VPS29Q9UBQ0 182 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 SLC22A13Q9Y226 551 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 TOP2AP11388 1531 aaKnown RBP2.1□□□□□ -2.07
VPS8-202ENST00000421069 HMGXB3Q12766 1538 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 LAMC3Q9Y6N6 1575 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 ROCK1Q13464 1354 aa2.1□□□□□ -2.07
VPS8-202ENST00000421069 ZFYVE9O95405 1425 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 KIF21AQ7Z4S6 1674 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 URB2Q14146 1524 aaKnown RBP2.09□□□□□ -2.07
VPS8-202ENST00000421069 CLDN24A6NM45 220 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 OR4C45A6NMZ5 311 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 EEF1E1-BLOC1S5C9J1V9 151 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 INMT-MINDY4F8WBC2 141 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 KPNA3O00505 521 aaPredicted RBP2.09□□□□□ -2.07
VPS8-202ENST00000421069 TRAPPC3O43617 180 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 CTSGP08311 255 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 FAM228BP0C875 321 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 CPMP14384 443 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 ALOX5APP20292 161 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 MSNP26038 577 aaKnown RBP2.09□□□□□ -2.07
VPS8-202ENST00000421069 FUSP35637 526 aaKnown RBP eCLIP2.09□□□□□ -2.07
VPS8-202ENST00000421069 CD200P41217 278 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 TBPL1P62380 186 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 REEP5Q00765 189 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 PSG4Q00888 419 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 FABP9Q0Z7S8 132 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 PMAIP1Q13794 54 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 SPOPLQ6IQ16 392 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 ZNF322Q6U7Q0 402 aaPredicted RBP2.09□□□□□ -2.07
VPS8-202ENST00000421069 SPATA12Q7Z6I5 190 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 CLDN22Q8N7P3 220 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 SFRP2Q96HF1 295 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.09□□□□□ -2.07
VPS8-202ENST00000421069 TIMM22Q9Y584 194 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 HSPE1-MOB4S4R3N1 261 aa2.09□□□□□ -2.07
VPS8-202ENST00000421069 CACNA1DQ01668 2161 aa2.09□□□□□ -2.08
VPS8-202ENST00000421069 SHANK3Q9BYB0 1731 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 ABCC8Q09428 1581 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 ZNF407Q9C0G0 2248 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 IGHV1-69-2A0A0G2JMI3 117 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 GRIFINA4D1Z8 144 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 C17orf51A8MQB3 221 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 G3V3Q6 166 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 CHP2O43745 196 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 KRT75O95678 551 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 IFNA6P05013 189 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 OR5G3P0C626 314 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 IDH3GP51553 393 aaPredicted RBP2.08□□□□□ -2.08
VPS8-202ENST00000421069 ZNF140P52738 457 aaPredicted RBP2.08□□□□□ -2.08
VPS8-202ENST00000421069 TNFAIP6P98066 277 aaPredicted RBP2.08□□□□□ -2.08
VPS8-202ENST00000421069 SRSF6Q13247 344 aaKnown RBP2.08□□□□□ -2.08
VPS8-202ENST00000421069 LGALS9BQ3B8N2 356 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 LGALS9CQ6DKI2 356 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 C2orf91Q6ZV80 131 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 AKAP14Q86UN6 197 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 KRTAP13-1Q8IUC0 172 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 C1orf158Q8N1D5 194 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 CNEP1R1Q8N9A8 125 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 OR1L8Q8NGR8 309 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 CENPHQ9H3R5 247 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 FAM96AQ9H5X1 160 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 MRPL40Q9NQ50 206 aaKnown RBP2.08□□□□□ -2.08
VPS8-202ENST00000421069 GPR84Q9NQS5 396 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 MINOS1-NBL1R4GNA1 71 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 TTC21AQ8NDW8 1320 aa2.08□□□□□ -2.08
VPS8-202ENST00000421069 IFT140Q96RY7 1462 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 NAV1Q8NEY1 1877 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 TOPBP1Q92547 1522 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 CHD5Q8TDI0 1954 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 MDFIC2A0A1B0GVS7 189 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 OR5K4A6NMS3 321 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 C9JCJ5 164 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 LST1O00453 97 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 UBFD1O14562 309 aaKnown RBP2.07□□□□□ -2.08
VPS8-202ENST00000421069 IGHV1-69P01742 117 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 GABRA2P47869 451 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 POLR2GP62487 172 aaKnown RBP eCLIP2.07□□□□□ -2.08
VPS8-202ENST00000421069 CCL7P80098 99 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 SLC22A24Q8N4F4 322 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 SGMS2Q8NHU3 365 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 PHOSPHO2Q8TCD6 241 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 PRAP1Q96NZ9 151 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 AICDAQ9GZX7 198 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 C8orf4Q9NR00 106 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 CMTM6Q9NX76 183 aa2.07□□□□□ -2.08
VPS8-202ENST00000421069 PAQR5Q9NXK6 330 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms