RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 PRDM13Q9H4Q3 707 aa9.91□□□□□ -0.82
LIMK1-202ENST00000418310 NBASA2RRP1 2371 aa9.91□□□□□ -0.82
LIMK1-202ENST00000418310 C1QTNF9P0C862 333 aa9.91□□□□□ -0.82
LIMK1-202ENST00000418310 NPPCP23582 126 aa9.91□□□□□ -0.82
LIMK1-202ENST00000418310 THBS3P49746 956 aa9.91□□□□□ -0.82
LIMK1-202ENST00000418310 TNFSF10P50591 281 aa9.91□□□□□ -0.82
LIMK1-202ENST00000418310 FOSL1P15407 271 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 DUX4L9Q6RFH8 374 aaPredicted RBP9.9□□□□□ -0.82
LIMK1-202ENST00000418310 CXXC4Q9H2H0 198 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 SPAARA0A1B0GVQ0 90 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 SLC31A2O15432 143 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 SPINT2O43291 252 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 GNG10P50151 68 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 RND2P52198 227 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 ZNF114Q8NC26 417 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 OR4A16Q8NH70 328 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 P2RX4Q99571 388 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 ZNRD1Q9P1U0 126 aa9.9□□□□□ -0.82
LIMK1-202ENST00000418310 C15orf62A8K5M9 175 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 PMS2P5A8MQ11 134 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 AQP7O14520 342 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 PROP1O75360 226 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 ACTL6BO94805 426 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 CLDN14O95500 239 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 WT1P19544 449 aaPredicted RBP9.89□□□□□ -0.83
LIMK1-202ENST00000418310 PRDX2P32119 198 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 GPX4P36969 197 aaPredicted RBP9.89□□□□□ -0.83
LIMK1-202ENST00000418310 KIR2DL2P43627 348 aaPredicted RBP9.89□□□□□ -0.83
LIMK1-202ENST00000418310 SMIM21Q3B7S5 101 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 Q6ZT83 130 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 NEIL1Q96FI4 390 aaPredicted RBP9.89□□□□□ -0.83
LIMK1-202ENST00000418310 CD1BP29016 333 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 MSMPQ1L6U9 139 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 OTOGLQ3ZCN5 2332 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 PDLIM3Q53GG5 364 aaPredicted RBP9.89□□□□□ -0.83
LIMK1-202ENST00000418310 DBX2Q6ZNG2 339 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 TCF23Q7RTU1 214 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 MOGAT3Q86VF5 341 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 WDR31Q8NA23 367 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 ZNF729A6NN14 1252 aaPredicted RBP9.89□□□□□ -0.83
LIMK1-202ENST00000418310 M0R1B8 84 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 PFN1P07737 140 aaKnown RBP9.89□□□□□ -0.83
LIMK1-202ENST00000418310 SNRPCP09234 159 aaKnown RBP9.89□□□□□ -0.83
LIMK1-202ENST00000418310 GNB2P62879 340 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 PMS2P11Q13670 270 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 ZNF718Q3SXZ3 478 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 SLC35E4Q6ICL7 350 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 OR6C3Q9NZP0 311 aa9.89□□□□□ -0.83
LIMK1-202ENST00000418310 ZNF320A2RRD8 509 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 AMBPP02760 352 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 CD33P20138 364 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 RPRMLQ8N4K4 120 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 Q8TCH9 128 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 TAAR6Q96RI8 345 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 ZDHHC11Q9H8X9 412 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 PIGBOS1A0A0B4J2F0 54 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 A0A1B0GV90 55 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 FAM90A26D6RGX4 464 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 SPINK4O60575 86 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 ARL14EPLP0DKL9 152 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 HIST1H1BP16401 226 aaKnown RBP9.88□□□□□ -0.83
LIMK1-202ENST00000418310 CD82P27701 267 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 ZNF134P52741 427 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 GNB1P62873 340 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 INO80CQ6PI98 192 aaPredicted RBP9.88□□□□□ -0.83
LIMK1-202ENST00000418310 RAB29O14966 203 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 USF2Q15853 346 aaPredicted RBP9.88□□□□□ -0.83
LIMK1-202ENST00000418310 DEFB109BQ30KR1 87 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 ACOT6Q3I5F7 207 aaPredicted RBP9.88□□□□□ -0.83
LIMK1-202ENST00000418310 SPATA31B1PQ5VZV4 182 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
LIMK1-202ENST00000418310 OR2T10Q8NGZ9 312 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 OR1P1Q8NH06 330 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 MS4A5Q9H3V2 200 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 SRD5A3Q9H8P0 318 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 CLCF1Q9UBD9 225 aa9.88□□□□□ -0.83
LIMK1-202ENST00000418310 SPTA1P02549 2419 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 ELOA3CA0A087WX78 387 aaPredicted RBP9.87□□□□□ -0.83
LIMK1-202ENST00000418310 A0A087X0M5 115 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 A0A1B0GX30 115 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 TMEM210A6NLX4 147 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 RNF224P0DH78 156 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 DEFB124Q8NES8 71 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 PITPNC1Q9UKF7 332 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 IGKV1D-17A0A075B6S4 117 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 IGHV2OR16-5A0A0B4J2B6 119 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 IGHV1-18A0A0C4DH31 117 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 SCO2A0A1W2PP80 73 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 C17orf112F2Z3M2 114 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 HRASP01112 189 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 DUTP33316 252 aaKnown RBP9.87□□□□□ -0.83
LIMK1-202ENST00000418310 ASPHD1Q5U4P2 390 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 C1orf229Q6ZS94 237 aaPredicted RBP9.87□□□□□ -0.83
LIMK1-202ENST00000418310 SNRNP40Q96DI7 357 aaKnown RBP9.87□□□□□ -0.83
LIMK1-202ENST00000418310 OR2V2Q96R30 315 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 AGMATQ9BSE5 352 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 CTDSP1Q9GZU7 261 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 HES4Q9HCC6 221 aa9.87□□□□□ -0.83
LIMK1-202ENST00000418310 COL27A1Q8IZC6 1860 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms