RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	ZNF57	Q68EA5	555 aa	Predicted RBP	12.83	□□□□□ -0.36
DDR1-231	ENST00000417521	ETV3L	Q6ZN32	361 aa		12.83	□□□□□ -0.36
DDR1-231	ENST00000417521	C18orf65	Q6ZTR6	163 aa		12.83	□□□□□ -0.36
DDR1-231	ENST00000417521	C8orf86	Q6ZUL3	223 aa		12.83	□□□□□ -0.36
DDR1-231	ENST00000417521	MRPL41	Q8IXM3	137 aa	Known RBP	12.83	□□□□□ -0.36
DDR1-231	ENST00000417521	ZNF383	Q8NA42	475 aa		12.83	□□□□□ -0.36
DDR1-231	ENST00000417521	KLHL30-AS1	Q8NEE0	82 aa		12.83	□□□□□ -0.36
DDR1-231	ENST00000417521	IL7	P13232	177 aa		12.82	□□□□□ -0.36
DDR1-231	ENST00000417521	PSMB8	P28062	276 aa		12.82	□□□□□ -0.36
DDR1-231	ENST00000417521	PPIF	P30405	207 aa	Known RBP	12.82	□□□□□ -0.36
DDR1-231	ENST00000417521	GNRHR	P30968	328 aa		12.82	□□□□□ -0.36
DDR1-231	ENST00000417521	ZNF818P	Q6ZRF7	136 aa		12.82	□□□□□ -0.36
DDR1-231	ENST00000417521	LHFPL1	Q86WI0	220 aa		12.82	□□□□□ -0.36
DDR1-231	ENST00000417521	HRASLS	Q9HDD0	168 aa		12.82	□□□□□ -0.36
DDR1-231	ENST00000417521	LINC00854	A0A1B0GVQ3	168 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	LINC00473	A8K010	186 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	DISC1	C4P0D8	188 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	ATP6V0E1	O15342	81 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	TNFSF12	O43508	249 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	SLC22A5	O76082	557 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	DUT	P33316	252 aa	Known RBP	12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	INPP1	P49441	399 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	PPP5C	P53041	499 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	AP3S2	P59780	193 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	PDPN	Q86YL7	162 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	OR51S1	Q8NGJ8	323 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	MRGPRF	Q96AM1	343 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	P2RX4	Q99571	388 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	FBXL15	Q9H469	300 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	PARP11	Q9NR21	331 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	MCUB	Q9NWR8	336 aa		12.81	□□□□□ -0.36
DDR1-231	ENST00000417521	APOA2	P02652	100 aa		12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	RPL30	P62888	115 aa	Known RBP	12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	CX3CL1	P78423	397 aa		12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	ZNF846	Q147U1	533 aa		12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	PLGLA	Q15195	96 aa		12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	LCNL1	Q6ZST4	164 aa		12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	TERB2	Q8NHR7	220 aa		12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	TSNAX	Q99598	290 aa	Known RBP	12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	WDR12	Q9GZL7	423 aa	Known RBP	12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	WSB1	Q9Y6I7	421 aa		12.8	□□□□□ -0.36
DDR1-231	ENST00000417521	TRAV41	A0A0B4J266	112 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521		G3V318	75 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	SPDEF	O95238	335 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	IGKV1-16	P04430	117 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	CRIP2	P52943	208 aa	Predicted RBP	12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	RPS16	P62249	146 aa	Known RBP	12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	TAGLN	Q01995	201 aa	Known RBP	12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	PSG5	Q15238	335 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	MINDY2	Q8NBR6	621 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	DDB2	Q92466	427 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	FLYWCH2	Q96CP2	140 aa	Known RBP	12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	CCDC32	Q9BV29	185 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	GPR61	Q9BZJ8	451 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	PLXNB1	O43157	2135 aa		12.79	□□□□□ -0.36
DDR1-231	ENST00000417521	CCL24	O00175	119 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	FCN1	O00602	326 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	IGLV1-40	P01703	118 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	PRB2	P02812	416 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	PGAM2	P15259	253 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	PI3	P19957	117 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	CD40LG	P29965	261 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	FAU	P35544	74 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	UCP3	P55916	312 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	MSMO1	Q15800	293 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	PHLDA2	Q53GA4	152 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	OR2B11	Q5JQS5	317 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	TMEM65	Q6PI78	240 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	ZNF562	Q6V9R5	426 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	IDO2	Q6ZQW0	420 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	KCTD9	Q7L273	389 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	BVES	Q8NE79	360 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	OR13C8	Q8NGS7	320 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	MARCH1	Q8TCQ1	289 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	MYOZ3	Q8TDC0	251 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	RAX2	Q96IS3	184 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	HSD17B10	Q99714	261 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	PRRT1	Q99946	306 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	MCRIP2	Q9BUT9	160 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	RSRP1	Q9BUV0	290 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	SLC35D1	Q9NTN3	355 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	METTL1	Q9UBP6	276 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	DNAH3	Q8TD57	4116 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	GPR31	O00270	319 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	LGALS7	P47929	136 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	NDP	Q00604	133 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	LPCAT3	Q6P1A2	487 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	SLC38A6	Q8IZM9	456 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	TCTEX1D1	Q8N7M0	179 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	ZBTB34	Q8NCN2	500 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	C4orf3	Q8WVX3	66 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	TCTEX1D2	Q8WW35	142 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	ADTRP	Q96IZ2	230 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	UBE2E2	Q96LR5	201 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	KLK15	Q9H2R5	256 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	SLC2A8	Q9NY64	477 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	NUBP2	Q9Y5Y2	271 aa		12.78	□□□□□ -0.36
DDR1-231	ENST00000417521	PGLYRP1	O75594	196 aa	Predicted RBP	12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms