RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CRYGBP07316 175 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 ECI1P42126 302 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 CD83Q01151 205 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 TMEM267Q0VDI3 215 aaPredicted RBP18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 C2orf68Q2NKX9 166 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 TEX38Q6PEX7 206 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 TCTEX1D1Q8N7M0 179 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 VSTM2AQ8TAG5 236 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 ZFAND1Q8TCF1 268 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 ABHD5Q8WTS1 349 aa18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 ZNF486Q96H40 463 aaPredicted RBP18.18■□□□□ 0.5
SMARCB1-205ENST00000417137 ATP6V0E1O15342 81 aa18.17■□□□□ 0.5
SMARCB1-205ENST00000417137 HPRT1P00492 218 aa18.17■□□□□ 0.5
SMARCB1-205ENST00000417137 RLN1P04808 185 aa18.17■□□□□ 0.5
SMARCB1-205ENST00000417137 BRWD1-AS2P59051 145 aa18.17■□□□□ 0.5
SMARCB1-205ENST00000417137 PHLDA2Q53GA4 152 aa18.17■□□□□ 0.5
SMARCB1-205ENST00000417137 NDUFA11Q86Y39 141 aa18.17■□□□□ 0.5
SMARCB1-205ENST00000417137 PRRT1Q99946 306 aa18.17■□□□□ 0.5
SMARCB1-205ENST00000417137 CITED2Q99967 270 aaPredicted RBP18.17■□□□□ 0.5
SMARCB1-205ENST00000417137 TRAV41A0A0B4J266 112 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 F2RP25116 425 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 FAUP35544 74 aaKnown RBP18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 FXYD3Q14802 87 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 ZNF79Q15937 498 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 C10orf99Q6UWK7 81 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 TOMM5Q8N4H5 51 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 OR4C16Q8NGL9 310 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 TPSG1Q9NRR2 321 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 SCP2D1Q9UJQ7 156 aa18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 TSSC4Q9Y5U2 329 aaPredicted RBP18.16■□□□□ 0.5
SMARCB1-205ENST00000417137 RAMP3O60896 148 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 OR2A4O95047 310 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 ZNF735P0CB33 412 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 SAA1P0DJI8 122 aaPredicted RBP18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 TAS2R31P59538 309 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 GNB1P62873 340 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 PRSS8Q16651 343 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 GDPD1Q8N9F7 314 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 ARPC1AQ92747 370 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 RHOVQ96L33 236 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 OR2A7Q96R45 310 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 PLEKHA2Q9HB19 425 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 WSB1Q9Y6I7 421 aa18.15■□□□□ 0.5
SMARCB1-205ENST00000417137 ACTL6BO94805 426 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 ELANEP08246 267 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 NQO2P16083 231 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 CRIP2P52943 208 aaPredicted RBP18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 PPP5CP53041 499 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 FOXE3Q13461 319 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 TCTEX1D4Q5JR98 221 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 PRR31Q5SQ13 230 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 FAAP20Q6NZ36 180 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 IDO2Q6ZQW0 420 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 TBC1D26Q86UD7 250 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 MMD2Q8IY49 270 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 DEDD2Q8WXF8 326 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 SLC2A9Q9NRM0 540 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 FAM212BQ9NTI7 297 aaPredicted RBP18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 ZFP57Q9NU63 452 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 MCUBQ9NWR8 336 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 NUBP2Q9Y5Y2 271 aa18.14■□□□□ 0.49
SMARCB1-205ENST00000417137 IGHG4P01861 327 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 RND3P61587 244 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 ZNF45Q02386 682 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 PJVKQ0ZLH3 352 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 SURF2Q15527 256 aaPredicted RBP18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 NSUN5P1Q3KNT7 163 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 AKIRIN2Q53H80 203 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 CXorf66Q5JRM2 361 aaPredicted RBP18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 KHDC1LQ5JSQ8 128 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 SCGB3A2Q96PL1 93 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 SRRQ9GZT4 340 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 COMMD9Q9P000 198 aa18.13■□□□□ 0.49
SMARCB1-205ENST00000417137 G3V318 75 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 MPPED1O15442 326 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 EGR2P11161 476 aaPredicted RBP18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 INPP1P49441 399 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 NDPQ00604 133 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 CFHR3Q02985 330 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 TNXAQ16473 311 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 ECSCRQ19T08 205 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 CNPY1Q3B7I2 92 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 TMEM65Q6PI78 240 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 UNQ5815/PRO19632Q6UWF5 114 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 LINC00299Q6ZSB3 139 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 VKORC1L1Q8N0U8 176 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 PUSL1Q8N0Z8 303 aaKnown RBP18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 CCDC71LQ8N9Z2 235 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 OR51S1Q8NGJ8 323 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 OR4A5Q8NH83 315 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 GRPEL2Q8TAA5 225 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 MARCH1Q8TCQ1 289 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 TRIM63Q969Q1 353 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 TMEM68Q96MH6 324 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 SLC2A8Q9NY64 477 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 COPZ2Q9P299 210 aa18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 C14orf166Q9Y224 244 aaKnown RBP18.12■□□□□ 0.49
SMARCB1-205ENST00000417137 ARPC1BO15143 372 aaKnown RBP18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 KBTBD11O94819 623 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 CTSDP07339 412 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms