RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ZNF66Q6ZN08 573 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 MFSD4AQ8N468 514 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 OR13F1Q8NGS4 319 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 SECTM1Q8WVN6 248 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 ACOT12Q8WYK0 555 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 SNAPC3Q92966 411 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 DLX4Q92988 240 aaPredicted RBP12.07□□□□□ -0.48
ITGB1-204ENST00000417122 IFT46Q9NQC8 304 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 TAS2R8Q9NYW2 309 aa12.07□□□□□ -0.48
ITGB1-204ENST00000417122 MSGN1A6NI15 193 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 CREBL2O60519 120 aaPredicted RBP12.06□□□□□ -0.48
ITGB1-204ENST00000417122 PPYP01298 95 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 APELAP0DMC3 54 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 ECI1P42126 302 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 VBP1P61758 197 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 TMEM69Q5SWH9 247 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 OR5AP2Q8NGF4 316 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 OR4S2Q8NH73 311 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 SRSF12Q8WXF0 261 aaKnown RBP12.06□□□□□ -0.48
ITGB1-204ENST00000417122 KCTD12Q96CX2 325 aaKnown RBP12.06□□□□□ -0.48
ITGB1-204ENST00000417122 ZNF430Q9H8G1 570 aaPredicted RBP12.06□□□□□ -0.48
ITGB1-204ENST00000417122 CCL28Q9NRJ3 127 aa12.06□□□□□ -0.48
ITGB1-204ENST00000417122 A0A0G2JLM5 398 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 C13orf42A0A1B0GVH6 325 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 TNFSF12O43508 249 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 ACTL6BO94805 426 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 BRI3O95415 125 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 BRWD1-AS2P59051 145 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 TAS2R20P59543 309 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 DCTN2Q13561 401 aaKnown RBP12.05□□□□□ -0.48
ITGB1-204ENST00000417122 MSMO1Q15800 293 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 MMD2Q8IY49 270 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 VKORC1L1Q8N0U8 176 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 GIMAP1Q8WWP7 306 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 GPHA2Q96T91 129 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 TINAGL1Q9GZM7 467 aaPredicted RBP12.05□□□□□ -0.48
ITGB1-204ENST00000417122 COA4Q9NYJ1 87 aa12.05□□□□□ -0.48
ITGB1-204ENST00000417122 MPPED1O15442 326 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 KIR2DS2P43631 304 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 FXYD4P59646 89 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 ZNF429Q86V71 674 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 ZBTB34Q8NCN2 500 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 VSTM2AQ8TAG5 236 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 PRR25Q96S07 402 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 SLC5A7Q9GZV3 580 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 RANGRFQ9HD47 186 aaPredicted RBP12.04□□□□□ -0.48
ITGB1-204ENST00000417122 COMMD3Q9UBI1 195 aa12.04□□□□□ -0.48
ITGB1-204ENST00000417122 SAP30O75446 220 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 OR2A4O95047 310 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 EIF4EP06730 217 aaKnown RBP12.03□□□□□ -0.48
ITGB1-204ENST00000417122 OR9G9P0C7N8 305 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 SMIM18P0DKX4 95 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 PRSS3P35030 304 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 DEFA5Q01523 94 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 ADAD2Q8NCV1 583 aaKnown RBP12.03□□□□□ -0.48
ITGB1-204ENST00000417122 CMTM3Q96MX0 182 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 OR2A7Q96R45 310 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 SPIN2AQ99865 258 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 SPIN2BQ9BPZ2 258 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 EHFQ9NZC4 300 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 ANAPC10Q9UM13 185 aa12.03□□□□□ -0.48
ITGB1-204ENST00000417122 ZNF256Q9Y2P7 627 aaPredicted RBP12.03□□□□□ -0.48
ITGB1-204ENST00000417122 SMIM31A0A1B0GVY4 71 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 KBTBD11O94819 623 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 HRASP01112 189 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 RFX2P48378 723 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 HERV-K104P61576 105 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 CD69Q07108 199 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 CATR1Q13166 79 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 C10orf55Q5SWW7 151 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 ACSM6Q6P461 480 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 ZNF818PQ6ZRF7 136 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 TMEM17Q86X19 198 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 SPAG16Q8N0X2 631 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 PUSL1Q8N0Z8 303 aaKnown RBP12.02□□□□□ -0.49
ITGB1-204ENST00000417122 USMG5Q96IX5 58 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 B9D2Q9BPU9 175 aa12.02□□□□□ -0.49
ITGB1-204ENST00000417122 TNCP24821 2201 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 ANKRD34BA5PLL1 514 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 SULT1C2O00338 296 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 APOA1P02647 267 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 PMP2P02689 132 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 NAT1P18440 290 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 ZP3P21754 424 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 RORCP51449 518 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 DYRK1AQ13627 763 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 DHRS11Q6UWP2 260 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 ANKRD13BQ86YJ7 626 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 TTC9CQ8N5M4 171 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 OR5H2Q8NGV7 314 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 TMEM167AQ8TBQ9 72 aa12.01□□□□□ -0.49
ITGB1-204ENST00000417122 ZNF2Q9BSG1 426 aaPredicted RBP12.01□□□□□ -0.49
ITGB1-204ENST00000417122 NAA50Q9GZZ1 169 aaKnown RBP12.01□□□□□ -0.49
ITGB1-204ENST00000417122 LSM4Q9Y4Z0 139 aaKnown RBP12.01□□□□□ -0.49
ITGB1-204ENST00000417122 RBFOX2O43251 390 aaKnown RBP eCLIP12□□□□□ -0.49
ITGB1-204ENST00000417122 HPGDSO60760 199 aa12□□□□□ -0.49
ITGB1-204ENST00000417122 RBMXL2O75526 392 aaKnown RBP12□□□□□ -0.49
ITGB1-204ENST00000417122 GABARAPO95166 117 aa12□□□□□ -0.49
ITGB1-204ENST00000417122 LY86O95711 162 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms