RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ACAA1P09110 424 aaPredicted RBP14.65□□□□□ -0.06
PHRF1-202ENST00000413872 C8orf88P0DMB2 117 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 RAX2Q96IS3 184 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 SEMA5BQ9P283 1151 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 IGKV3D-15A0A087WSY6 115 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 OR51G1Q8NGK1 321 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 PARD6AQ9NPB6 346 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 LINC00862A6NCI5 91 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 IFITM3Q01628 133 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 HIST3H3Q16695 136 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 RSG1Q9BU20 258 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 TMEM189A5PLL7 270 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 NPPCP23582 126 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 TSPOP30536 169 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 C12orf57Q99622 126 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 ELOVL1Q9BW60 279 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 MRPL32Q9BYC8 188 aaKnown RBP14.65□□□□□ -0.06
PHRF1-202ENST00000413872 PLSCR2Q9NRY7 297 aa14.65□□□□□ -0.06
PHRF1-202ENST00000413872 CSN3P07498 182 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 FCGR2BP31994 310 aaPredicted RBP14.64□□□□□ -0.07
PHRF1-202ENST00000413872 TFPI2P48307 235 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 TMEM183BQ1AE95 376 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 MRPL54Q6P161 138 aaKnown RBP14.64□□□□□ -0.07
PHRF1-202ENST00000413872 GREB1Q4ZG55 1949 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 M0R2Z0 102 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 ZG16O60844 167 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 ZNF137PP52743 207 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 TBR1Q16650 682 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 THSD7BQ9C0I4 1608 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 Q6ZN92 141 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 IL36RNQ9UBH0 155 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 A0A0G2JLM5 398 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 RND3P61587 244 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 FAM216BQ8N7L0 139 aa14.64□□□□□ -0.07
PHRF1-202ENST00000413872 A0A1B0GTI1 187 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 PQLC2LA1A4F0 135 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 RHBDL1O75783 438 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 PMS2P11Q13670 270 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 MIC13Q5XKP0 118 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 CHD5Q8TDI0 1954 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 HKR1P10072 659 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 RPS20P60866 119 aaKnown RBP14.63□□□□□ -0.07
PHRF1-202ENST00000413872 MEF2BQ02080 365 aaPredicted RBP14.63□□□□□ -0.07
PHRF1-202ENST00000413872 ELOBQ15370 118 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 RRN3P1Q2M238 152 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 TUSC1Q2TAM9 212 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 OR10D4PQ8NGN7 298 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 SCN2AQ99250 2005 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 ZNF837Q96EG3 531 aaPredicted RBP14.63□□□□□ -0.07
PHRF1-202ENST00000413872 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.63□□□□□ -0.07
PHRF1-202ENST00000413872 PGPA6NDG6 321 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 LCN2P80188 198 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 GATAD1Q8WUU5 269 aa14.63□□□□□ -0.07
PHRF1-202ENST00000413872 LRP11Q86VZ4 500 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 SPRR3Q9UBC9 169 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 HSPB1P04792 205 aaKnown RBP14.62□□□□□ -0.07
PHRF1-202ENST00000413872 ZNF418Q8TF45 676 aaPredicted RBP14.62□□□□□ -0.07
PHRF1-202ENST00000413872 RGP1Q92546 391 aaPredicted RBP14.62□□□□□ -0.07
PHRF1-202ENST00000413872 WBP1Q96G27 269 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 MRPL37Q9BZE1 423 aaKnown RBP14.62□□□□□ -0.07
PHRF1-202ENST00000413872 C19orf67A6NJJ6 358 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 HAX1O00165 279 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 SMAD7O15105 426 aaKnown RBP14.62□□□□□ -0.07
PHRF1-202ENST00000413872 WDFY1Q8IWB7 410 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 SPTBN2O15020 2390 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 C1QL2Q7Z5L3 287 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 GSX1Q9H4S2 264 aaPredicted RBP14.62□□□□□ -0.07
PHRF1-202ENST00000413872 HSPB7Q9UBY9 170 aa14.62□□□□□ -0.07
PHRF1-202ENST00000413872 PF4P02776 101 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 ZIC4Q8N9L1 334 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 MAP1LC3CQ9BXW4 147 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 TMSB15BA0A087X1C1 80 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 APCSP02743 223 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 C7orf69Q9H7B7 122 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 SNURFLB1AK76 121 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 MT-ND6P03923 174 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 ELF5Q9UKW6 265 aaPredicted RBP14.61□□□□□ -0.07
PHRF1-202ENST00000413872 CXCL2P19875 107 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 MAS1LP35410 378 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 HSPB8Q9UJY1 196 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 AUP1Q9Y679 476 aa14.61□□□□□ -0.07
PHRF1-202ENST00000413872 ZNF646O15015 1829 aaPredicted RBP14.61□□□□□ -0.07
PHRF1-202ENST00000413872 RIF1Q5UIP0 2472 aaKnown RBP14.6□□□□□ -0.07
PHRF1-202ENST00000413872 AP4M1O00189 453 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 SNRPD3P62318 126 aaKnown RBP14.6□□□□□ -0.07
PHRF1-202ENST00000413872 LYRM7Q5U5X0 104 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 MYOZ3Q8TDC0 251 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 GGACTQ9BVM4 153 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 OR51M1Q9H341 326 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 FBLN5Q9UBX5 448 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 ALPK2Q86TB3 2170 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 CELA3BP08861 270 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 CCL1P22362 96 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 LYPD3O95274 346 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 OR13A1Q8NGR1 328 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 GTF3AQ92664 365 aaKnown RBP14.6□□□□□ -0.07
PHRF1-202ENST00000413872 GALNT14Q96FL9 552 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 JMJD8Q96S16 334 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 TGFAP01135 160 aa14.6□□□□□ -0.07
PHRF1-202ENST00000413872 TRGV3P03979 118 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms