RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 OR9G4Q8NGQ1 327 aa17.08■□□□□ 0.32
MSH6-202ENST00000411819 USMG5Q96IX5 58 aa17.08■□□□□ 0.32
MSH6-202ENST00000411819 ZNF430Q9H8G1 570 aaPredicted RBP17.08■□□□□ 0.32
MSH6-202ENST00000411819 BRI3O95415 125 aa17.07■□□□□ 0.32
MSH6-202ENST00000411819 KLF5Q13887 457 aaPredicted RBP17.07■□□□□ 0.32
MSH6-202ENST00000411819 RPEL1Q2QD12 228 aa17.07■□□□□ 0.32
MSH6-202ENST00000411819 ZNF343Q6P1L6 599 aa17.07■□□□□ 0.32
MSH6-202ENST00000411819 CNIH2Q6PI25 160 aa17.07■□□□□ 0.32
MSH6-202ENST00000411819 OR51E2Q9H255 320 aa17.07■□□□□ 0.32
MSH6-202ENST00000411819 ZMAT4Q9H898 229 aa17.07■□□□□ 0.32
MSH6-202ENST00000411819 RHBDL2Q9NX52 303 aa17.07■□□□□ 0.32
MSH6-202ENST00000411819 RBMX2Q9Y388 322 aaKnown RBP17.07■□□□□ 0.32
MSH6-202ENST00000411819 IGKV1D-13A0A0B4J2D9 117 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 SLC22A5O76082 557 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 HLA-DQB1P01920 261 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 PRH1P02810 166 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 IGKV1-13P0DP09 117 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 SDC2P34741 201 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 C10orf55Q5SWW7 151 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 MMD2Q8IY49 270 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 TCTEX1D2Q8WW35 142 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 ADAM30Q9UKF2 790 aa17.06■□□□□ 0.32
MSH6-202ENST00000411819 C3orf84H3BNL1 204 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 SSX5O60225 188 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 RBMXL2O75526 392 aaKnown RBP17.05■□□□□ 0.32
MSH6-202ENST00000411819 RPL30P62888 115 aaKnown RBP17.05■□□□□ 0.32
MSH6-202ENST00000411819 RHOGP84095 191 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 EXOSC2Q13868 293 aaKnown RBP17.05■□□□□ 0.32
MSH6-202ENST00000411819 TATDN3Q17R31 274 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 SGPP2Q8IWX5 399 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 SPIN2AQ99865 258 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 SPIN2BQ9BPZ2 258 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 YTHDF1Q9BYJ9 559 aaKnown RBP17.05■□□□□ 0.32
MSH6-202ENST00000411819 ANXA10Q9UJ72 324 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 SPATA2Q9UM82 520 aa17.05■□□□□ 0.32
MSH6-202ENST00000411819 LOC100506127A0A0U1RQW1 187 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 CLEC2LP0C7M8 214 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 IGHV4-30-4P0DP06 118 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 ARPC4P59998 168 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 ZNF773Q6PK81 442 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 VKORC1L1Q8N0U8 176 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 OR4S2Q8NH73 311 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 RNF167Q9H6Y7 350 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 AKIP1Q9NQ31 210 aa17.04■□□□□ 0.32
MSH6-202ENST00000411819 FAM223BA6NKX1 122 aa17.03■□□□□ 0.32
MSH6-202ENST00000411819 H0Y980 276 aa17.03■□□□□ 0.32
MSH6-202ENST00000411819 IGLV2-14P01704 120 aa17.03■□□□□ 0.32
MSH6-202ENST00000411819 IDNKQ5T6J7 187 aa17.03■□□□□ 0.32
MSH6-202ENST00000411819 FAM223AQ8IWN6 122 aa17.03■□□□□ 0.32
MSH6-202ENST00000411819 SNAPC3Q92966 411 aa17.03■□□□□ 0.32
MSH6-202ENST00000411819 HSD17B10Q99714 261 aaKnown RBP17.03■□□□□ 0.32
MSH6-202ENST00000411819 TAS2R8Q9NYW2 309 aa17.03■□□□□ 0.32
MSH6-202ENST00000411819 ZNF45Q02386 682 aa17.02■□□□□ 0.32
MSH6-202ENST00000411819 ATP5G2Q06055 141 aa17.02■□□□□ 0.32
MSH6-202ENST00000411819 IL34Q6ZMJ4 242 aa17.02■□□□□ 0.32
MSH6-202ENST00000411819 Q8N1Y9 231 aa17.02■□□□□ 0.32
MSH6-202ENST00000411819 BEST4Q8NFU0 473 aa17.02■□□□□ 0.32
MSH6-202ENST00000411819 OR5H6Q8NGV6 325 aa17.02■□□□□ 0.32
MSH6-202ENST00000411819 MUC7Q8TAX7 377 aa17.02■□□□□ 0.32
MSH6-202ENST00000411819 ETV7Q9Y603 341 aa17.02■□□□□ 0.32
MSH6-202ENST00000411819 TRAV18A0A075B6X5 111 aa17.01■□□□□ 0.31
MSH6-202ENST00000411819 OR2A4O95047 310 aa17.01■□□□□ 0.31
MSH6-202ENST00000411819 NEDD8Q15843 81 aa17.01■□□□□ 0.31
MSH6-202ENST00000411819 LCN12Q6JVE5 192 aa17.01■□□□□ 0.31
MSH6-202ENST00000411819 VSTM2AQ8TAG5 236 aa17.01■□□□□ 0.31
MSH6-202ENST00000411819 SECTM1Q8WVN6 248 aa17.01■□□□□ 0.31
MSH6-202ENST00000411819 SLC25A38Q96DW6 304 aa17.01■□□□□ 0.31
MSH6-202ENST00000411819 PEMTQ9UBM1 199 aa17.01■□□□□ 0.31
MSH6-202ENST00000411819 HMX3A6NHT5 357 aa17■□□□□ 0.31
MSH6-202ENST00000411819 OR2J3O76001 311 aa17■□□□□ 0.31
MSH6-202ENST00000411819 KBTBD11O94819 623 aa17■□□□□ 0.31
MSH6-202ENST00000411819 CSN3P07498 182 aa17■□□□□ 0.31
MSH6-202ENST00000411819 GTSCR1Q86UQ5 136 aa17■□□□□ 0.31
MSH6-202ENST00000411819 SLC25A42Q86VD7 318 aa17■□□□□ 0.31
MSH6-202ENST00000411819 MFSD4AQ8N468 514 aa17■□□□□ 0.31
MSH6-202ENST00000411819 TTC9CQ8N5M4 171 aa17■□□□□ 0.31
MSH6-202ENST00000411819 GVQW1Q8N7I0 195 aa17■□□□□ 0.31
MSH6-202ENST00000411819 FYTTD1Q96QD9 318 aaKnown RBP17■□□□□ 0.31
MSH6-202ENST00000411819 OR2A7Q96R45 310 aa17■□□□□ 0.31
MSH6-202ENST00000411819 GPHA2Q96T91 129 aa17■□□□□ 0.31
MSH6-202ENST00000411819 TRBV9A0A0B4J1U6 114 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 DPPA5A6NC42 116 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 BMPR1BO00238 502 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 TNFSF12O43508 249 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 FCER2P06734 321 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 PTHLHP12272 177 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 RPL27AP46776 148 aaKnown RBP16.99■□□□□ 0.31
MSH6-202ENST00000411819 SCAND1P57086 179 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 ZNF66Q6ZN08 573 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 SSX9Q7RTT3 188 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 Q8N402 240 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 NECAP1Q8NC96 275 aa16.99■□□□□ 0.31
MSH6-202ENST00000411819 FCGR2CP31995 323 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 EIF4EBP1Q13541 118 aaPredicted RBP16.98■□□□□ 0.31
MSH6-202ENST00000411819 C15orf32Q32M92 178 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 C19orf35Q6ZS72 473 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 OR13F1Q8NGS4 319 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 TMEM167AQ8TBQ9 72 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 TM2D3Q9BRN9 247 aa16.98■□□□□ 0.31
MSH6-202ENST00000411819 CCL28Q9NRJ3 127 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms