RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 TAS2R8Q9NYW2 309 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 COL7A1Q02388 2944 aa14.69□□□□□ -0.06
SF3A1-202ENST00000411423 MSGN1A6NI15 193 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 LINC01619G3V211 115 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 DGCR2P98153 550 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 TNXAQ16473 311 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 DEFB121Q5J5C9 76 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 OR5AP2Q8NGF4 316 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 TCTEX1D2Q8WW35 142 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 S100A16Q96FQ6 103 aaKnown RBP14.68□□□□□ -0.06
SF3A1-202ENST00000411423 SLA2Q9H6Q3 261 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 ZNF355PQ9NSJ1 428 aa14.68□□□□□ -0.06
SF3A1-202ENST00000411423 OVOL1O14753 267 aa14.67□□□□□ -0.06
SF3A1-202ENST00000411423 SLC22A5O76082 557 aa14.67□□□□□ -0.06
SF3A1-202ENST00000411423 CDK10Q15131 360 aa14.67□□□□□ -0.06
SF3A1-202ENST00000411423 TMEM69Q5SWH9 247 aa14.67□□□□□ -0.06
SF3A1-202ENST00000411423 SRSF12Q8WXF0 261 aaKnown RBP14.67□□□□□ -0.06
SF3A1-202ENST00000411423 HSD17B10Q99714 261 aaKnown RBP14.67□□□□□ -0.06
SF3A1-202ENST00000411423 DCUN1D5Q9BTE7 237 aa14.67□□□□□ -0.06
SF3A1-202ENST00000411423 COMMD3Q9UBI1 195 aa14.67□□□□□ -0.06
SF3A1-202ENST00000411423 TNCP24821 2201 aa14.67□□□□□ -0.06
SF3A1-202ENST00000411423 A0A1B0GW64 132 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 E7EUB6 86 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 RAMP3O60896 148 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 ECI1P42126 302 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 CBX5P45973 191 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 FXYD4P59646 89 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 CTF1Q16619 201 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 PUSL1Q8N0Z8 303 aaKnown RBP14.66□□□□□ -0.06
SF3A1-202ENST00000411423 ADAD2Q8NCV1 583 aaKnown RBP14.66□□□□□ -0.06
SF3A1-202ENST00000411423 GIMAP1Q8WWP7 306 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 ACOT12Q8WYK0 555 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 TINAGL1Q9GZM7 467 aaPredicted RBP14.66□□□□□ -0.06
SF3A1-202ENST00000411423 PRELID3BQ9Y3B1 194 aa14.66□□□□□ -0.06
SF3A1-202ENST00000411423 H3BUA1 57 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 PRH1P02810 166 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 HSPB1P04792 205 aaKnown RBP14.65□□□□□ -0.06
SF3A1-202ENST00000411423 MYOD1P15172 320 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 NAT1P18440 290 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 RFX2P48378 723 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 DYRK1AQ13627 763 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 ZNF66Q6ZN08 573 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 ZNF818PQ6ZRF7 136 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 C19orf35Q6ZS72 473 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 KCTD12Q96CX2 325 aaKnown RBP14.65□□□□□ -0.06
SF3A1-202ENST00000411423 PHB2Q99623 299 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 SLC5A7Q9GZV3 580 aa14.65□□□□□ -0.06
SF3A1-202ENST00000411423 HPGDSO60760 199 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 GABARAPO95166 117 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 BRI3O95415 125 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 TRBV12-3P01733 135 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 PMP2P02689 132 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 ZNF45Q02386 682 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 MSMO1Q15800 293 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 ANKRD13BQ86YJ7 626 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 LYSMD2Q8IV50 215 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 OR4S2Q8NH73 311 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 TMEM68Q96MH6 324 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 IFT46Q9NQC8 304 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 COA4Q9NYJ1 87 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 EHFQ9NZC4 300 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 ADAM30Q9UKF2 790 aa14.64□□□□□ -0.07
SF3A1-202ENST00000411423 MRPS7Q9Y2R9 242 aaKnown RBP14.64□□□□□ -0.07
SF3A1-202ENST00000411423 LSM4Q9Y4Z0 139 aaKnown RBP14.64□□□□□ -0.07
SF3A1-202ENST00000411423 ANKRD34BA5PLL1 514 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 HMX3A6NHT5 357 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 TEX22C9J3V5 150 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 SULT1C2O00338 296 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 KBTBD11O94819 623 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 IL6RP08887 468 aaPredicted RBP14.63□□□□□ -0.07
SF3A1-202ENST00000411423 ELK1P19419 428 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 CD40LGP29965 261 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 C11orf87Q6NUJ2 197 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 ACSM6Q6P461 480 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 TMEM17Q86X19 198 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 TMEM167AQ8TBQ9 72 aa14.63□□□□□ -0.07
SF3A1-202ENST00000411423 CGB1A6NKQ9 187 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 OR2A4O95047 310 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 OR9G9P0C7N8 305 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 GNRHRP30968 328 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 ALDH3B2P48448 385 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 GPR107Q5VW38 600 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 DHRS11Q6UWP2 260 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 SSX9Q7RTT3 188 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 HAPLN4Q86UW8 402 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 MMD2Q8IY49 270 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 SPAG16Q8N0X2 631 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 GPX8Q8TED1 209 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 OR2A7Q96R45 310 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 ZNF2Q9BSG1 426 aaPredicted RBP14.62□□□□□ -0.07
SF3A1-202ENST00000411423 FXYD6Q9H0Q3 95 aa14.62□□□□□ -0.07
SF3A1-202ENST00000411423 C13orf42A0A1B0GVH6 325 aa14.61□□□□□ -0.07
SF3A1-202ENST00000411423 SAP30O75446 220 aa14.61□□□□□ -0.07
SF3A1-202ENST00000411423 APOA1P02647 267 aa14.61□□□□□ -0.07
SF3A1-202ENST00000411423 PRSS3P35030 304 aa14.61□□□□□ -0.07
SF3A1-202ENST00000411423 ZNF343Q6P1L6 599 aa14.61□□□□□ -0.07
SF3A1-202ENST00000411423 ZBTB34Q8NCN2 500 aa14.61□□□□□ -0.07
SF3A1-202ENST00000411423 MOB3AQ96BX8 217 aa14.61□□□□□ -0.07
SF3A1-202ENST00000411423 TRBV9A0A0B4J1U6 114 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 TRAV3A0A0B4J244 114 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms