RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TP53RKQ96S44 253 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 FAAP24Q9BTP7 215 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 MRPL20Q9BYC9 149 aaKnown RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SRRQ9GZT4 340 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 FN3KQ9H479 309 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 PIGUQ9H490 435 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 RPF2Q9H7B2 306 aaKnown RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 LPAR2Q9HBW0 351 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 CHMP1AQ9HD42 196 aaPredicted RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 PIH1D3Q9NQM4 214 aaKnown RBP-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 MKS1Q9NXB0 559 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 MAT2BQ9NZL9 334 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SNX12Q9UMY4 172 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 WASHC3Q9Y3C0 194 aa-2.47□□□□□ -2.8
RNU4-88P-201ENST00000411220 SHROOM2Q13796 1616 aa-2.47□□□□□ -2.81
RNU4-88P-201ENST00000411220 USP32Q8NFA0 1604 aa-2.47□□□□□ -2.81
RNU4-88P-201ENST00000411220 ARAP1Q96P48 1450 aa-2.47□□□□□ -2.81
RNU4-88P-201ENST00000411220 CHD5Q8TDI0 1954 aa-2.47□□□□□ -2.81
RNU4-88P-201ENST00000411220 KIF16BQ96L93 1317 aa-2.47□□□□□ -2.81
RNU4-88P-201ENST00000411220 ARHGEF10O15013 1369 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 DNMT1P26358 1616 aaKnown RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 TCRBV4S1A1TA0A5B7 111 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 SLC5A10A0PJK1 596 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 A8MXE2 369 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 K7EQS6 105 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCL22O00626 93 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 SLC16A7O60669 478 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 ZMPSTE24O75844 475 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 BCAS2O75934 225 aaPredicted RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 STARD3NLO95772 234 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 AGR2O95994 175 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR52Z1P0C646 297 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR13C7P0DN81 318 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 PYYP10082 97 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 IDO1P14902 403 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 PRKACAP17612 351 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 SPI1P17947 270 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 EIF2S2P20042 333 aaKnown RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 C5AR1P21730 350 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 MPZP25189 248 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 PSMA4P25789 261 aaKnown RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 SERPINB5P36952 375 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 RAB27AP51159 221 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 IFITM2Q01629 132 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 RPL18AQ02543 176 aaKnown RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCDC158Q5M9N0 1113 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 C10orf120Q5SQS8 335 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 DRAM2Q6UX65 266 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCDC149Q6ZUS6 474 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 DPPA2Q7Z7J5 298 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 CREBRFQ8IUR6 639 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 SAMD3Q8N6K7 520 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 SPC24Q8NBT2 197 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR8J1Q8NGP2 316 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR13D1Q8NGV5 346 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR10AG1Q8NH19 301 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCDC110Q8TBZ0 833 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 ORAOV1Q8WV07 137 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 RPL3LQ92901 407 aaKnown RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 CNDP2Q96KP4 475 aaKnown RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 JSRP1Q96MG2 331 aaPredicted RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 SLC30A2Q9BRI3 323 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 HEMGNQ9BXL5 484 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 MRPL13Q9BYD1 178 aaKnown RBP-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 UCK2Q9BZX2 261 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 NPVFQ9HCQ7 196 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 GIN1Q9NXP7 522 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 PLEK2Q9NYT0 353 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 IFNKQ9P0W0 207 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 LGALS13Q9UHV8 139 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 NDUFA12Q9UI09 145 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 PCTPQ9UKL6 214 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 STAP1Q9ULZ2 295 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 NDUFAF1Q9Y375 327 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR1A2Q9Y585 309 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 DSPPQ9NZW4 1301 aa-2.48□□□□□ -2.81
RNU4-88P-201ENST00000411220 SETBP1Q9Y6X0 1596 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 KIF1BO60333 1816 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 POLA1P09884 1462 aaPredicted RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 ATAD2BQ9ULI0 1458 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 IGHV3OR15-7A0A075B7D8 119 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TRBV7-1A0A0A6YYK4 115 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TRAV1-2A0A0B4J238 106 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TRBV7-4A0A0J9YYF1 115 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCDC182A6NF36 153 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 H0YCG3 227 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 J3KT08 172 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 UBE2CO00762 179 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 TOM1L1O75674 476 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR2B3O76000 313 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 STK17BO94768 372 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 SMC2O95347 1197 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 GH1P01241 217 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 IL1BP01584 269 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR5H8P0DN80 308 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 MYL6BP14649 208 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 NCK1P16333 377 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 PPIBP23284 216 aaKnown RBP-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 S100A2P29034 98 aa-2.49□□□□□ -2.81
RNU4-88P-201ENST00000411220 HSPA9P38646 679 aaKnown RBP-2.49□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms