RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 UCP3P55916 312 aa21.29■■□□□ 1
SPIRE1-202ENST00000409402 SMDT1Q9H4I9 107 aa21.29■■□□□ 1
SPIRE1-202ENST00000409402 TRAV34A0A0B4J273 112 aa21.29■■□□□ 1
SPIRE1-202ENST00000409402 FAM53AQ6NSI3 398 aaPredicted RBP21.29■■□□□ 1
SPIRE1-202ENST00000409402 C1QTNF5Q9BXJ0 243 aa21.29■■□□□ 1
SPIRE1-202ENST00000409402 C17orf100A8MU93 164 aa21.29■■□□□ 1
SPIRE1-202ENST00000409402 LY6DQ14210 128 aa21.29■■□□□ 1
SPIRE1-202ENST00000409402 ASPHD2Q6ICH7 369 aa21.29■■□□□ 1
SPIRE1-202ENST00000409402 OR51G1Q8NGK1 321 aa21.28■■□□□ 1
SPIRE1-202ENST00000409402 NTN3O00634 580 aaPredicted RBP21.28■■□□□ 1
SPIRE1-202ENST00000409402 C8orf88P0DMB2 117 aa21.28■■□□□ 1
SPIRE1-202ENST00000409402 FAM216BQ8N7L0 139 aa21.28■■□□□ 1
SPIRE1-202ENST00000409402 MFAP2P55001 183 aa21.28■■□□□ 1
SPIRE1-202ENST00000409402 ATP5IP56385 69 aaPredicted RBP21.28■■□□□ 1
SPIRE1-202ENST00000409402 CFHR1Q03591 330 aa21.28■■□□□ 1
SPIRE1-202ENST00000409402 CDKN1AP38936 164 aa21.28■■□□□ 1
SPIRE1-202ENST00000409402 MEOX2P50222 304 aa21.28■■□□□ 1
SPIRE1-202ENST00000409402 NDUFB4O95168 129 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 RPL39P5Q59GN2 51 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 PHLDA3Q9Y5J5 127 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 GREB1LQ9C091 1923 aaPredicted RBP21.27■■□□□ 1
SPIRE1-202ENST00000409402 GPX1P07203 203 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 OR51M1Q9H341 326 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 CX3CL1P78423 397 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 OR4X2Q8NGF9 303 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 CBLN4Q9NTU7 201 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 AP4M1O00189 453 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 SIAH2O43255 324 aa21.27■■□□□ 1
SPIRE1-202ENST00000409402 RPS20P60866 119 aaKnown RBP21.27■■□□□ 1
SPIRE1-202ENST00000409402 MEF2CQ06413 473 aaPredicted RBP21.27■■□□□ 1
SPIRE1-202ENST00000409402 IBA57Q5T440 356 aaKnown RBP21.27■■□□□ 1
SPIRE1-202ENST00000409402 LOC389332A0A1B0GUA5 103 aa21.27■□□□□ 0.99
SPIRE1-202ENST00000409402 SULT1A2P50226 295 aa21.27■□□□□ 0.99
SPIRE1-202ENST00000409402 FAM201AQ5SY85 155 aa21.27■□□□□ 0.99
SPIRE1-202ENST00000409402 FAM90A1Q86YD7 464 aa21.27■□□□□ 0.99
SPIRE1-202ENST00000409402 CEP290O15078 2479 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 E9PLN8 166 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 RPL29P47914 159 aaKnown RBP21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 PSG7Q13046 419 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 SRSF9Q13242 221 aaKnown RBP eCLIP21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 VKORC1Q9BQB6 163 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 VPS25Q9BRG1 176 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 SPTA1P02549 2419 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 ABLIM2Q6H8Q1 611 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 C19orf24Q9BVV8 132 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 A0A0G2JLM5 398 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 OSR1Q8TAX0 266 aaPredicted RBP21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 AICDAQ9GZX7 198 aa21.26■□□□□ 0.99
SPIRE1-202ENST00000409402 IGKV1D-33P01593 117 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 IGKV1-33P01594 117 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 IGKV1D-43A0A0B4J1Z2 117 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 IQCF6A8MYZ5 107 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 EFEMP2O95967 443 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 C5orf66Q9H5L9 145 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 TUBA4BQ9H853 241 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 GALNT14Q96FL9 552 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 SMIM8Q96KF7 97 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 RTN4RQ9BZR6 473 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 ELF5Q9UKW6 265 aaPredicted RBP21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 HKR1P10072 659 aa21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 PEAR1Q5VY43 1037 aaPredicted RBP21.25■□□□□ 0.99
SPIRE1-202ENST00000409402 SGMS2Q8NHU3 365 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 NPIPB3Q92617 1050 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 ANOS1P23352 680 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 ARID2Q68CP9 1835 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 C5orf52A6NGY3 159 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 MIEN1Q9BRT3 115 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 C12orf77C9JDV5 145 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 ZNF343Q6P1L6 599 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 M0R143 59 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 IL4P05112 153 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 CD300CQ08708 224 aa21.24■□□□□ 0.99
SPIRE1-202ENST00000409402 MRPL32Q9BYC8 188 aaKnown RBP21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 NPDC1Q9NQX5 325 aaPredicted RBP21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 KBTBD11-OT1A0A1B0GTJ5 212 aa21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 TMEM187Q14656 261 aa21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 CYB561D1Q8N8Q1 229 aa21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 ZFC3H1O60293 1989 aaKnown RBP21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 M0R3E3 92 aa21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 CELA3BP08861 270 aa21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 SVILO95425 2214 aa21.23■□□□□ 0.99
SPIRE1-202ENST00000409402 REPIN1Q9BWE0 567 aaKnown RBP21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 FBXL15Q9H469 300 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 MYOFQ9NZM1 2061 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 NUTF2P61970 127 aaKnown RBP21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 RPS11P62280 158 aaKnown RBP eCLIP21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 OR4C5Q8NGB2 326 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 CDC42EP3Q9UKI2 254 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 MEF2BQ02080 365 aaPredicted RBP21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 TBR1Q16650 682 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 RAB24Q969Q5 203 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 GCSHP23434 173 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 CKS2P33552 79 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 WDR25Q64LD2 544 aaPredicted RBP21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 JMJD8Q96S16 334 aa21.22■□□□□ 0.99
SPIRE1-202ENST00000409402 PPP1R27Q86WC6 154 aa21.21■□□□□ 0.99
SPIRE1-202ENST00000409402 IGHV3-35A0A0C4DH35 117 aa21.21■□□□□ 0.99
SPIRE1-202ENST00000409402 H0YL77 283 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms