RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 MMDQ15546 238 aa16.48■□□□□ 0.23
C4orf48-201ENST00000409248 RBMXL1Q96E39 390 aaKnown RBP16.48■□□□□ 0.23
C4orf48-201ENST00000409248 TSNAXQ99598 290 aaKnown RBP16.48■□□□□ 0.23
C4orf48-201ENST00000409248 FAM240BA0A1B0GVZ2 78 aa16.47■□□□□ 0.23
C4orf48-201ENST00000409248 SH2D7A6NKC9 451 aaPredicted RBP16.47■□□□□ 0.23
C4orf48-201ENST00000409248 SHOXO15266 292 aa16.47■□□□□ 0.23
C4orf48-201ENST00000409248 RBFOX2O43251 390 aaKnown RBP eCLIP16.47■□□□□ 0.23
C4orf48-201ENST00000409248 FBXO24O75426 580 aa16.47■□□□□ 0.23
C4orf48-201ENST00000409248 C2orf68Q2NKX9 166 aa16.47■□□□□ 0.23
C4orf48-201ENST00000409248 TMEM177Q53S58 311 aa16.47■□□□□ 0.23
C4orf48-201ENST00000409248 TMED4Q7Z7H5 227 aa16.47■□□□□ 0.23
C4orf48-201ENST00000409248 OSR1Q8TAX0 266 aaPredicted RBP16.47■□□□□ 0.23
C4orf48-201ENST00000409248 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
C4orf48-201ENST00000409248 PALMDQ9NP74 551 aa16.47■□□□□ 0.23
C4orf48-201ENST00000409248 TEX13DA0A0J9YY54 714 aaPredicted RBP16.46■□□□□ 0.23
C4orf48-201ENST00000409248 NBR2O15453 112 aa16.46■□□□□ 0.23
C4orf48-201ENST00000409248 SLC6A1P30531 599 aa16.46■□□□□ 0.23
C4orf48-201ENST00000409248 LGALS7P47929 136 aa16.46■□□□□ 0.23
C4orf48-201ENST00000409248 Q8N9W7 124 aa16.46■□□□□ 0.23
C4orf48-201ENST00000409248 ENKURQ8TC29 256 aa16.46■□□□□ 0.23
C4orf48-201ENST00000409248 RASL11BQ9BPW5 248 aa16.46■□□□□ 0.23
C4orf48-201ENST00000409248 NAA60Q9H7X0 242 aa16.46■□□□□ 0.23
C4orf48-201ENST00000409248 FAM212BQ9NTI7 297 aaPredicted RBP16.46■□□□□ 0.23
C4orf48-201ENST00000409248 KIAA1456Q9P272 454 aa16.46■□□□□ 0.23
C4orf48-201ENST00000409248 H0Y980 276 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 RAMP3O60896 148 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 B3GALNT1O75752 331 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 SPDEFO95238 335 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 BRWD1-AS2P59051 145 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 TAS2R31P59538 309 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 SLC35E3Q7Z769 313 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 SGPP2Q8IWX5 399 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 CENPSQ8N2Z9 138 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 ADAD2Q8NCV1 583 aaKnown RBP16.45■□□□□ 0.22
C4orf48-201ENST00000409248 NPBQ8NG41 125 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 WIPF2Q8TF74 440 aaPredicted RBP16.45■□□□□ 0.22
C4orf48-201ENST00000409248 RITA1Q96K30 269 aa16.45■□□□□ 0.22
C4orf48-201ENST00000409248 C3orf85A0A1B0GTC6 90 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 CRYM-AS1A6NIL9 109 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 KCNAB3O43448 404 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 HPRT1P00492 218 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 AKR1C4P17516 323 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 F2RL1P55085 397 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 CENPVQ7Z7K6 275 aaPredicted RBP16.44■□□□□ 0.22
C4orf48-201ENST00000409248 FOXRED2Q8IWF2 684 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 FAM71E2Q8N5Q1 922 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 C11orf44Q8N8P7 122 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 TMEM230Q96A57 120 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 PLSCR3Q9NRY6 295 aa16.44■□□□□ 0.22
C4orf48-201ENST00000409248 ARPC1BO15143 372 aaKnown RBP16.43■□□□□ 0.22
C4orf48-201ENST00000409248 NDUFA3O95167 84 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 HRASP01112 189 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 IGHG2P01859 326 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 TCRBP04435 133 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 SERPINE2P07093 398 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 CNTFRP26992 372 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 LPAR6P43657 344 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 DCTN2Q13561 401 aaKnown RBP16.43■□□□□ 0.22
C4orf48-201ENST00000409248 PLGLAQ15195 96 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 VMA21Q3ZAQ7 101 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 OR4X2Q8NGF9 303 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 AIFM2Q9BRQ8 373 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 C20orf85Q9H1P6 137 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 PLEKHA2Q9HB19 425 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 COMMD9Q9P000 198 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 KCNIP3Q9Y2W7 256 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 FBN3Q75N90 2809 aa16.43■□□□□ 0.22
C4orf48-201ENST00000409248 RRHO14718 337 aa16.42■□□□□ 0.22
C4orf48-201ENST00000409248 S1PR2O95136 353 aa16.42■□□□□ 0.22
C4orf48-201ENST00000409248 PSG5Q15238 335 aa16.42■□□□□ 0.22
C4orf48-201ENST00000409248 TMEM128Q5BJH2 165 aa16.42■□□□□ 0.22
C4orf48-201ENST00000409248 OR5AU1Q8NGC0 362 aa16.42■□□□□ 0.22
C4orf48-201ENST00000409248 CHPT1Q8WUD6 406 aa16.42■□□□□ 0.22
C4orf48-201ENST00000409248 TP53RKQ96S44 253 aa16.42■□□□□ 0.22
C4orf48-201ENST00000409248 FLVCR2Q9UPI3 526 aa16.42■□□□□ 0.22
C4orf48-201ENST00000409248 AP4M1O00189 453 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 SLC25A17O43808 307 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 IGLV2-23P01705 113 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 OR5AC1P0C628 307 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 CD28P10747 220 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 ANXA3P12429 323 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 RPA2P15927 270 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 NQO2P16083 231 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 UBE2MP61081 183 aaKnown RBP16.41■□□□□ 0.22
C4orf48-201ENST00000409248 UBE2KP61086 200 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 ERVK-16P61578 105 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 DHODHQ02127 395 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 C5orf64Q2M2E5 130 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 TRIM16LQ309B1 348 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 ZNF585BQ52M93 769 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 TREML4Q6UXN2 200 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 SLC25A42Q86VD7 318 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 GALNT14Q96FL9 552 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 FBXL15Q9H469 300 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 NUDT15Q9NV35 164 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 METTL1Q9UBP6 276 aaKnown RBP16.41■□□□□ 0.22
C4orf48-201ENST00000409248 NUBP2Q9Y5Y2 271 aa16.41■□□□□ 0.22
C4orf48-201ENST00000409248 PSMB11A5LHX3 300 aa16.4■□□□□ 0.22
C4orf48-201ENST00000409248 SRRM4A7MD48 611 aaKnown RBP16.4■□□□□ 0.22
C4orf48-201ENST00000409248 UCP1P25874 307 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms