RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 EFNB2P52799 333 aa10.28□□□□□ -0.76
CACNA1C-213ENST00000399629 FAM201AQ5SY85 155 aa10.28□□□□□ -0.76
CACNA1C-213ENST00000399629 TMEM238LA0A1B0GVL6 79 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 A6NJY4 79 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 H3BTX0 84 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 J3QKU1 62 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 J3QW42 95 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 M0R143 59 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 RBFOX2O43251 390 aaKnown RBP eCLIP10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 ERGP11308 486 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 OR51G1Q8NGK1 321 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 TMEM167AQ8TBQ9 72 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 FOXA2Q9Y261 457 aaPredicted RBP10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 KCNK7Q9Y2U2 307 aa10.27□□□□□ -0.76
CACNA1C-213ENST00000399629 PRRC2BQ5JSZ5 2229 aaKnown RBP10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 CDC42EP3Q9UKI2 254 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 LEPP41159 167 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 IFITM10A6NMD0 228 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 DLK1P80370 383 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 A0A0G2JMM0 328 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 A0A1W2PPB8 328 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 A0A1W2PRS3 328 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 KIR3DP1A8MWS1 328 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 IGHV3-48P01763 117 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 CD59P13987 128 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 SP5Q6BEB4 398 aaPredicted RBP10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 ZNF880Q6PDB4 577 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 FAM24BQ8N5W8 94 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 ZNF383Q8NA42 475 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 KLK15Q9H2R5 256 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 LHFPL6Q9Y693 200 aa10.27□□□□□ -0.77
CACNA1C-213ENST00000399629 ZNF688P0C7X2 276 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 ZNF708P17019 499 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 SRSF7Q16629 238 aaKnown RBP eCLIP10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 CLLU1Q5K131 121 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 MIC13Q5XKP0 118 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 CLDND2Q8NHS1 167 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 SDF2L1Q9HCN8 221 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 BET1LQ9NYM9 111 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 COL24A1Q17RW2 1714 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 MFAP2P55001 183 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 IBA57Q5T440 356 aaKnown RBP10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 FGFRL1Q8N441 504 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 SRSF12Q8WXF0 261 aaKnown RBP10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 RPRMQ9NS64 109 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 FAM216BQ8N7L0 139 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 CHCHD2Q9Y6H1 151 aaPredicted RBP10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 MARCH11A6NNE9 402 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 OR10D4PQ8NGN7 298 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 PHYHIPLQ96FC7 376 aa10.26□□□□□ -0.77
CACNA1C-213ENST00000399629 UNC119Q13432 240 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 TMEM177Q53S58 311 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 RPL39P5Q59GN2 51 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 PAPPA-AS1Q5QFB9 102 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 Q6ZNX1 250 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 OR9G4Q8NGQ1 327 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 TRGV4A0A0C4DH28 118 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 A6NDN8 102 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 B4DEV8 164 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 AP4M1O00189 453 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 WNT2P09544 360 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 HKR1P10072 659 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 RAG2P55895 527 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 C10orf128Q5T292 105 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 CMC4P56277 68 aaPredicted RBP10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 ZNF385CQ66K41 422 aaPredicted RBP10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 LEMD1Q68G75 181 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 DRAM1Q8N682 238 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 C21orf62Q9NYP8 219 aa10.25□□□□□ -0.77
CACNA1C-213ENST00000399629 TMEM218A2RU14 115 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 SPAG17Q6Q759 2223 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 MBNL2Q5VZF2 373 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 LINC00305Q7Z4B0 112 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 DLEC1Q9Y238 1755 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 ELOA3CA0A087WX78 387 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 C8orf88P0DMB2 117 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 RCC1P18754 421 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 ERVK11-1P61568 191 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 PRB3Q04118 309 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 NRIP2Q9BQI9 281 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 REPIN1Q9BWE0 567 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 PGPEP1Q9NXJ5 209 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 IGHMP01871 453 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 PAX1P15863 534 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 CRYBA2P53672 197 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 MEF2CQ06413 473 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 ASCL4Q6XD76 172 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 HSF4Q9ULV5 492 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 FUT9Q9Y231 359 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 MYO7AQ13402 2215 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 FSTP19883 344 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 GOLT1AQ6ZVE7 132 aa10.24□□□□□ -0.77
CACNA1C-213ENST00000399629 RPLP1P05386 114 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 MRPL32Q9BYC8 188 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-213ENST00000399629 HOXA6P31267 233 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms