RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 COL4A5P29400 1685 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 IGLV3-16A0A075B6K0 115 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 PITX3O75364 302 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 IL4P05112 153 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 ERGP11308 486 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 MBNL2Q5VZF2 373 aaKnown RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 FAM214BQ7L5A3 538 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 RNF122Q9H9V4 155 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 hCG_38984A0A1B0GV85 526 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 FAM106CPP0CH98 169 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 UCNP55089 124 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 SRSF6Q13247 344 aaKnown RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 ZNF324BQ6AW86 544 aaPredicted RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 FAM19A2Q8N3H0 131 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 CACNA1BQ00975 2339 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 TMEM189A5PLL7 270 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 CDX1P47902 265 aaPredicted RBP8.04□□□□□ -1.12
ATL3-201ENST00000398868 SLC25A1P53007 311 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 SLC52A3Q9NQ40 469 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 C1RLQ9NZP8 487 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 CACNA1DQ01668 2161 aa8.04□□□□□ -1.12
ATL3-201ENST00000398868 IGHV4-39P01824 125 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 FOLR2P14207 255 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 ASCL5Q7RTU5 278 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 OR52M1Q8NGK5 317 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 HMGCLL1Q8TB92 370 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 PXMP4Q9Y6I8 212 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 GTF3C1Q12789 2109 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 A0A1B0GU03 582 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 CTDSPLO15194 276 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 CRYBA2P53672 197 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 DMKNQ6E0U4 476 aaPredicted RBP8.03□□□□□ -1.12
ATL3-201ENST00000398868 RNF115Q9Y4L5 304 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 APOMO95445 188 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 HIST1H2BAQ96A08 127 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 CACNA1EQ15878 2313 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 IGKV1-8A0A0C4DH67 115 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 AMY1AP04745 511 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 C19orf54Q5BKX5 351 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 TEPPQ6URK8 271 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 CTXND1A0A1B0GTU2 59 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 HBZP02008 142 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 PDLIM4P50479 330 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 ZP4Q12836 540 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 SFRP2Q96HF1 295 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 KCNS1Q96KK3 526 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 SF3B6Q9Y3B4 125 aaKnown RBP8.03□□□□□ -1.12
ATL3-201ENST00000398868 LAMB2P55268 1798 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 K7N7A8 449 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 PTP4A3O75365 173 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 KIR2DS2P43631 304 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 TMEM174Q8WUU8 243 aa8.03□□□□□ -1.12
ATL3-201ENST00000398868 SS18L1O75177 396 aaPredicted RBP8.02□□□□□ -1.12
ATL3-201ENST00000398868 ARL14EPLP0DKL9 152 aa8.02□□□□□ -1.12
ATL3-201ENST00000398868 CACNG7P62955 275 aa8.02□□□□□ -1.12
ATL3-201ENST00000398868 TMEM91Q6ZNR0 172 aa8.02□□□□□ -1.12
ATL3-201ENST00000398868 FOXA3P55318 350 aaPredicted RBP8.02□□□□□ -1.13
ATL3-201ENST00000398868 CXorf66Q5JRM2 361 aaPredicted RBP8.02□□□□□ -1.13
ATL3-201ENST00000398868 DDB2Q92466 427 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 PRSS27Q9BQR3 290 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 HS3ST3B1Q9Y662 390 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 C1QTNF9BB2RNN3 333 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 BSPH1Q075Z2 132 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 SMAGPQ0VAQ4 97 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 MEIG1Q5JSS6 88 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 OR4D5Q8NGN0 318 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 ANAPC13Q9BS18 74 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 WDR54Q9H977 334 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 SIRT4Q9Y6E7 314 aaPredicted RBP8.02□□□□□ -1.13
ATL3-201ENST00000398868 OR2H2O95918 312 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 HKR1P10072 659 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 MAS1LP35410 378 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 C11orf68Q9H3H3 251 aaKnown RBP8.02□□□□□ -1.13
ATL3-201ENST00000398868 MPC1Q9Y5U8 109 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 COL22A1Q8NFW1 1626 aaPredicted RBP8.02□□□□□ -1.13
ATL3-201ENST00000398868 RBFOX2O43251 390 aaKnown RBP eCLIP8.02□□□□□ -1.13
ATL3-201ENST00000398868 ID1P41134 155 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 UCP3P55916 312 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 DLX6P56179 175 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 PMCHL2Q9BQD1 86 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 COL11A2P13942 1736 aaPredicted RBP8.02□□□□□ -1.13
ATL3-201ENST00000398868 ISG15P05161 165 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 AGAP20933 346 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 IRF3Q14653 427 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 PMCHL1Q16048 86 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 ATRAIDQ6UW56 229 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 BEND2Q8NDZ0 799 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 OR4A5Q8NH83 315 aa8.02□□□□□ -1.13
ATL3-201ENST00000398868 SPTBN1Q01082 2364 aaKnown RBP8.01□□□□□ -1.13
ATL3-201ENST00000398868 DPRXA6NFQ7 191 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 NDUFA3O95167 84 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 FAM53AQ6NSI3 398 aaPredicted RBP8.01□□□□□ -1.13
ATL3-201ENST00000398868 INO80CQ6PI98 192 aaPredicted RBP8.01□□□□□ -1.13
ATL3-201ENST00000398868 ABHD12Q8N2K0 398 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 CITED1Q99966 193 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 WFDC6Q9BQY6 131 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 RBKSQ9H477 322 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 PGPEP1Q9NXJ5 209 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 TRAV8-2A0A0B4J237 113 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 IGHV1-69-2A0A0G2JMI3 117 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms