RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 DCTN2Q13561 401 aaKnown RBP20.01■□□□□ 0.79
TMEM55B-202ENST00000398020 CENPVQ7Z7K6 275 aaPredicted RBP20.01■□□□□ 0.79
TMEM55B-202ENST00000398020 FOXRED2Q8IWF2 684 aa20.01■□□□□ 0.79
TMEM55B-202ENST00000398020 PARP11Q9NR21 331 aa20.01■□□□□ 0.79
TMEM55B-202ENST00000398020 SLC2A8Q9NY64 477 aa20.01■□□□□ 0.79
TMEM55B-202ENST00000398020 SCP2D1Q9UJQ7 156 aa20.01■□□□□ 0.79
TMEM55B-202ENST00000398020 KCNAB3O43448 404 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 CRYGBP07316 175 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 SAA1P0DJI8 122 aaPredicted RBP20■□□□□ 0.79
TMEM55B-202ENST00000398020 IL7P13232 177 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 PIGPP57054 158 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 CX3CL1P78423 397 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 NDPQ00604 133 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 VMA21Q3ZAQ7 101 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 PPP1R27Q86WC6 154 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 F2RP25116 425 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 UBE2KP61086 200 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 SSX9Q7RTT3 188 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 ZNF329Q86UD4 541 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 ZFAND1Q8TCF1 268 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 ZNF486Q96H40 463 aaPredicted RBP20■□□□□ 0.79
TMEM55B-202ENST00000398020 OR51J1Q9H342 316 aa20■□□□□ 0.79
TMEM55B-202ENST00000398020 AP4M1O00189 453 aa19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 ATP6V0E1O15342 81 aa19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 RBFOX2O43251 390 aaKnown RBP eCLIP19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 S1PR2O95136 353 aa19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 GNB1P62873 340 aa19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 STPG2Q8N412 459 aa19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 WIPF2Q8TF74 440 aaPredicted RBP19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 CITED1Q99966 193 aa19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 FBXO7Q9Y3I1 522 aa19.99■□□□□ 0.79
TMEM55B-202ENST00000398020 MPPED1O15442 326 aa19.98■□□□□ 0.79
TMEM55B-202ENST00000398020 SHISA2Q6UWI4 295 aa19.98■□□□□ 0.79
TMEM55B-202ENST00000398020 OR5AU1Q8NGC0 362 aa19.98■□□□□ 0.79
TMEM55B-202ENST00000398020 CD300LFQ8TDQ1 290 aa19.98■□□□□ 0.79
TMEM55B-202ENST00000398020 ABHD5Q8WTS1 349 aa19.98■□□□□ 0.79
TMEM55B-202ENST00000398020 S100ZQ8WXG8 99 aa19.98■□□□□ 0.79
TMEM55B-202ENST00000398020 RHOVQ96L33 236 aa19.98■□□□□ 0.79
TMEM55B-202ENST00000398020 HPRT1P00492 218 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 CTSDP07339 412 aaPredicted RBP19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 CD28P10747 220 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 RPA2P15927 270 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 ECI1P42126 302 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 MRGPRG-AS1Q2M3A8 158 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 TEX45Q8NA69 505 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 RTBDNQ9BSG5 229 aaPredicted RBP19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 FAM103A1Q9BTL3 118 aaKnown RBP19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 C5orf66Q9H5L9 145 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 COPZ2Q9P299 210 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 C14orf166Q9Y224 244 aaKnown RBP19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 WSB1Q9Y6I7 421 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 PSMB11A5LHX3 300 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 HRASP01112 189 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 LPAR6P43657 344 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 RND3P61587 244 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 SURF2Q15527 256 aaPredicted RBP19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 ZNF585BQ52M93 769 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 CHPT1Q8WUD6 406 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 GPR132Q9UNW8 380 aa19.97■□□□□ 0.79
TMEM55B-202ENST00000398020 IGF1P05019 195 aa19.96■□□□□ 0.79
TMEM55B-202ENST00000398020 SSBP2P81877 361 aaPredicted RBP19.96■□□□□ 0.79
TMEM55B-202ENST00000398020 ZNF846Q147U1 533 aa19.96■□□□□ 0.79
TMEM55B-202ENST00000398020 ZNF562Q6V9R5 426 aa19.96■□□□□ 0.79
TMEM55B-202ENST00000398020 PLEKHA2Q9HB19 425 aa19.96■□□□□ 0.79
TMEM55B-202ENST00000398020 VSIG4Q9Y279 399 aa19.96■□□□□ 0.79
TMEM55B-202ENST00000398020 G3V318 75 aa19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 ARPC1BO15143 372 aaKnown RBP19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 CNIH1O95406 144 aa19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 PRSS8Q16651 343 aa19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 GRPEL2Q8TAA5 225 aa19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 DEDD2Q8WXF8 326 aa19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 TP53RKQ96S44 253 aa19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 WDR12Q9GZL7 423 aaKnown RBP19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 ZNF430Q9H8G1 570 aaPredicted RBP19.95■□□□□ 0.78
TMEM55B-202ENST00000398020 FBXO24O75426 580 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 OR2A4O95047 310 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 NQO2P16083 231 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 TAS2R31P59538 309 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 FXYD3Q14802 87 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 OR4A47Q6IF82 309 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 PUSL1Q8N0Z8 303 aaKnown RBP19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 CCDC71LQ8N9Z2 235 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 OR2A7Q96R45 310 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 KBTBD11O94819 623 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 EGR2P11161 476 aaPredicted RBP19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 VDAC1P21796 283 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 CCR6P51684 374 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 TNXAQ16473 311 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 ECSCRQ19T08 205 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 SP6Q3SY56 376 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 TCTEX1D1Q8N7M0 179 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 ADAD2Q8NCV1 583 aaKnown RBP19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 ARPC1AQ92747 370 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 R3HDM4Q96D70 268 aa19.94■□□□□ 0.78
TMEM55B-202ENST00000398020 TNCP24821 2201 aa19.93■□□□□ 0.78
TMEM55B-202ENST00000398020 C3orf85A0A1B0GTC6 90 aa19.93■□□□□ 0.78
TMEM55B-202ENST00000398020 KRASP01116 189 aa19.93■□□□□ 0.78
TMEM55B-202ENST00000398020 TCTEX1D4Q5JR98 221 aa19.93■□□□□ 0.78
TMEM55B-202ENST00000398020 DMBX1Q8NFW5 382 aa19.93■□□□□ 0.78
TMEM55B-202ENST00000398020 VSTM2AQ8TAG5 236 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms