RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 TBX5Q99593 518 aa2.99□□□□□ -1.93
UBE3A-202ENST00000397954 PDCD1LG2Q9BQ51 273 aa2.99□□□□□ -1.93
UBE3A-202ENST00000397954 RSL24D1Q9UHA3 163 aaKnown RBP2.99□□□□□ -1.93
UBE3A-202ENST00000397954 ING4Q9UNL4 249 aa2.99□□□□□ -1.93
UBE3A-202ENST00000397954 RNF24Q9Y225 148 aa2.99□□□□□ -1.93
UBE3A-202ENST00000397954 WASHC3Q9Y3C0 194 aa2.99□□□□□ -1.93
UBE3A-202ENST00000397954 TRBV6-7A0A0A0MS04 114 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 DUXBA0A1W2PPF3 345 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 A0A1W2PPI3 338 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 A0A1W2PRD5 423 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 A0A1W2PRF3 423 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 A0A1W2PRM7 423 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 HSBP1L1C9JCN9 74 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 RAMP3O60896 148 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 CRTAPO75718 401 aaPredicted RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 LY6HO94772 140 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 IGHV4-38-2P0DP08 117 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 HIST1H1DP16402 221 aaKnown RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 S100A7P31151 101 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 RCVRNP35243 200 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 RND3P61587 244 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ARF6P62330 175 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 TAF9Q16594 264 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 LRRC37A5PQ49AS3 106 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 MORN2Q502X0 79 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 DHRS11Q6UWP2 260 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 FGFRL1Q8N441 504 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 JAGN1Q8N5M9 183 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 OR10X1Q8NGY0 326 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 RTN4IP1Q8WWV3 396 aaPredicted RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 PINX1Q96BK5 328 aaKnown RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ABHD14BQ96IU4 210 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 USMG5Q96IX5 58 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 LPAR5Q9H1C0 372 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 RBFOX1Q9NWB1 397 aaKnown RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 FKBP11Q9NYL4 201 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 TRAPPC2LQ9UL33 140 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ANK3Q12955 4377 aaKnown RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 LAMA5O15230 3695 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 IGHV3OR15-7A0A075B7D8 119 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 MEIKINA0A087WXM9 373 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 MEIOCA2RUB1 952 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 FAM223BA6NKX1 122 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 OR7C1O76099 320 aaPredicted RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 GABARAPO95166 117 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 DHFRP00374 187 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 PSMB6P28072 239 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 CD40LGP29965 261 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 TALDO1P37837 337 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 OR3A4PP47883 348 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 HCCSP53701 268 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 CMC4P56277 68 aaPredicted RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 EDDM3BP56851 147 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 CATR1Q13166 79 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 TMEM91Q6ZNR0 172 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 FAM223AQ8IWN6 122 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 PNKDQ8N490 385 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 DRAM1Q8N682 238 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ZNF645Q8N7E2 425 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ZNRF1Q8ND25 227 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 WFDC9Q8NEX5 89 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 OR13C5Q8NGS8 318 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 OR8U1Q8NH10 309 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 SCARB1Q8WTV0 552 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ZBTB9Q96C00 473 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 RAB3CQ96E17 227 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 YIPF6Q96EC8 236 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 NKX3-1Q99801 234 aaPredicted RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 PECRQ9BY49 303 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ZNF702PQ9H963 129 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 TREM1Q9NP99 234 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 PLEKHJ1Q9NW61 149 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ZNF221Q9UK13 617 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 HRNRQ86YZ3 2850 aaPredicted RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 NAV2Q8IVL1 2488 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 FBN2P35556 2912 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 OTOGQ6ZRI0 2925 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 CADP27708 2225 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 IGHV1-3A0A0C4DH29 117 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 A0A0G2JLM5 398 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 PIN1P1O15428 100 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 FCN3O75636 299 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 HLA-DQB1P01920 261 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 MBP02144 154 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 UBE2MP61081 183 aaKnown RBP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 SRPXP78539 464 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 EWSR1Q01844 656 aaKnown RBP eCLIP2.98□□□□□ -1.93
UBE3A-202ENST00000397954 MEF2DQ14814 521 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 TATDN3Q17R31 274 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 AKIRIN2Q53H80 203 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 VAX1Q5SQQ9 334 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 OR2G6Q5TZ20 316 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 SFXN4Q6P4A7 337 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 TMEM17Q86X19 198 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 HOGA1Q86XE5 327 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 ARRDC1Q8N5I2 433 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 C5orf56Q8N8D9 126 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 NDNFQ8TB73 568 aa2.98□□□□□ -1.93
UBE3A-202ENST00000397954 C4orf3Q8WVX3 66 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms