RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 RFESDQ8TAC1 157 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 SAP25Q8TEE9 199 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 SIGLEC12Q96PQ1 595 aa4.65□□□□□ -1.67
PTPRD-205ENST00000397611 HSD17B10Q99714 261 aaKnown RBP4.65□□□□□ -1.67
PTPRD-205ENST00000397611 BOKQ9UMX3 212 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF407Q9C0G0 2248 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 SS18L1O75177 396 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 OR1C1Q15619 314 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 CEACAM16Q2WEN9 425 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 RAB1CQ92928 201 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 LPAR2Q9HBW0 351 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 IL36RNQ9UBH0 155 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 IGKV1D-8A0A087WSZ0 117 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 NTN3O00634 580 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 MPDU1O75352 247 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 CXorf1O96002 111 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF32P17041 273 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 RELQ04864 619 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 SIT1Q9Y3P8 196 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 RBFOX2O43251 390 aaKnown RBP eCLIP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 SERF1AO75920 110 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 LINC00614P0C842 121 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 SUB1P53999 127 aaKnown RBP eCLIP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ZFP36L1Q07352 338 aaKnown RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 MMDQ15546 238 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 PEAR1Q5VY43 1037 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 MMD2Q8IY49 270 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 LYZL4Q96KX0 146 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 GNRHR2Q96P88 292 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 NCOR1P1Q9H4R4 102 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 OR2W1Q9Y3N9 320 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 RNF115Q9Y4L5 304 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 DPRXA6NFQ7 191 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 NGFP01138 241 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 GNG3P63215 75 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 TFF2Q03403 129 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 CEACAM21Q3KPI0 293 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF718Q3SXZ3 478 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ABHD17BQ5VST6 288 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 MRPL52Q86TS9 123 aaKnown RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 GPR146Q96CH1 333 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF385AQ96PM9 386 aaKnown RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 COMMD5Q9GZQ3 224 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 F11RQ9Y624 299 aaKnown RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 FANCMQ8IYD8 2048 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 PTPRSQ13332 1948 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ABCA7Q8IZY2 2146 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 SLC22A20A6NK97 555 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 C9JQL5 133 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 SMPD2O60906 423 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 MZT1Q08AG7 82 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 SCCPDHQ8NBX0 429 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 PEF1Q9UBV8 284 aaKnown RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 DUSP13Q9UII6 198 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ADAMTS9Q9P2N4 1935 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM30CPA0ZSE6 113 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 MT-ND6P03923 174 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 PRSS1P07477 247 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 CSN1S1P47710 185 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 PCSK4Q6UW60 755 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 R3HDM4Q96D70 268 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ADTRPQ96IZ2 230 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 AGMATQ9BSE5 352 aa4.64□□□□□ -1.67
PTPRD-205ENST00000397611 ZNF430Q9H8G1 570 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-205ENST00000397611 IGKV1-12A0A0C4DH73 117 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 IGKV1D-12P01611 117 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 IGHV3-13P01766 116 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 IGHV3-7P01780 117 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 ADMP35318 185 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 ARR3P36575 388 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 RPL13AP40429 203 aaKnown RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 MFAP2P55001 183 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 VASH2Q86V25 355 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 SFRP2Q96HF1 295 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 WNT5BQ9H1J7 359 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 TMEM167BQ9NRX6 74 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 NPSP0C0P6 89 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 TAF15Q92804 592 aaKnown RBP eCLIP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 KCNS1Q96KK3 526 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 OR8B2Q96RD0 313 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 MEGF9Q9H1U4 602 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 P01737 135 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 SP1P08047 785 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 SELEP16581 610 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 RELBQ01201 579 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 IZUMO4Q1ZYL8 232 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 MRGPRDQ8TDS7 321 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 H1FXQ92522 213 aaKnown RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 DERL1Q9BUN8 251 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 GPR35Q9HC97 309 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 ZFP30Q9Y2G7 519 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 TRAV9-1A0A075B6T8 112 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 CORTO00230 105 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 SLC17A3O00476 420 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 BTF3P20290 206 aaKnown RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 GCSHP23434 173 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 B3GALT5-AS1P59052 145 aa4.63□□□□□ -1.67
PTPRD-205ENST00000397611 IBA57Q5T440 356 aaKnown RBP4.63□□□□□ -1.67
PTPRD-205ENST00000397611 BEND2Q8NDZ0 799 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms