RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 J3QLI3 93 aa22.15■■□□□ 1.14
CPNE1-203ENST00000397442 TIMM23O14925 209 aa22.15■■□□□ 1.14
CPNE1-203ENST00000397442 RAB13P51153 203 aa22.15■■□□□ 1.14
CPNE1-203ENST00000397442 POU2AF1Q16633 256 aa22.15■■□□□ 1.14
CPNE1-203ENST00000397442 NOXA1Q86UR1 476 aa22.15■■□□□ 1.14
CPNE1-203ENST00000397442 RHOVQ96L33 236 aa22.15■■□□□ 1.14
CPNE1-203ENST00000397442 IGHV3OR16-10A0A075B7F0 116 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 MPC2O95563 127 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 IGHV4-38-2P0DP08 117 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 PSMB6P28072 239 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 NKX2-5P52952 324 aaPredicted RBP22.14■■□□□ 1.14
CPNE1-203ENST00000397442 RAB32Q13637 225 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 SMCO1Q147U7 214 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 RUSC1-AS1Q66K80 236 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 SSX9Q7RTT3 188 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 H2BFWTQ7Z2G1 175 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 OR4C13Q8NGP0 309 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 OSR1Q8TAX0 266 aaPredicted RBP22.14■■□□□ 1.14
CPNE1-203ENST00000397442 FLYWCH2Q96CP2 140 aaKnown RBP22.14■■□□□ 1.14
CPNE1-203ENST00000397442 MALSU1Q96EH3 234 aa22.14■■□□□ 1.14
CPNE1-203ENST00000397442 ABCA1O95477 2261 aa22.14■■□□□ 1.13
CPNE1-203ENST00000397442 KLF17Q5JT82 389 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-203ENST00000397442 THOC7Q6I9Y2 204 aaKnown RBP22.14■■□□□ 1.13
CPNE1-203ENST00000397442 DMBX1Q8NFW5 382 aa22.14■■□□□ 1.13
CPNE1-203ENST00000397442 RITA1Q96K30 269 aa22.14■■□□□ 1.13
CPNE1-203ENST00000397442 HRASP01112 189 aa22.13■■□□□ 1.13
CPNE1-203ENST00000397442 MBPP02686 304 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-203ENST00000397442 CYB5R2Q6BCY4 276 aa22.13■■□□□ 1.13
CPNE1-203ENST00000397442 COA4Q9NYJ1 87 aa22.13■■□□□ 1.13
CPNE1-203ENST00000397442 H0YIZ8 118 aa22.12■■□□□ 1.13
CPNE1-203ENST00000397442 SHOXO15266 292 aa22.12■■□□□ 1.13
CPNE1-203ENST00000397442 OR9G9P0C7N8 305 aa22.12■■□□□ 1.13
CPNE1-203ENST00000397442 EIF2B2P49770 351 aaKnown RBP22.12■■□□□ 1.13
CPNE1-203ENST00000397442 ERVK-16P61578 105 aa22.12■■□□□ 1.13
CPNE1-203ENST00000397442 FGL1Q08830 312 aa22.12■■□□□ 1.13
CPNE1-203ENST00000397442 CXorf66Q5JRM2 361 aaPredicted RBP22.12■■□□□ 1.13
CPNE1-203ENST00000397442 HARBI1Q96MB7 349 aa22.12■■□□□ 1.13
CPNE1-203ENST00000397442 TMEM140Q9NV12 185 aa22.12■■□□□ 1.13
CPNE1-203ENST00000397442 IL6RP08887 468 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-203ENST00000397442 GPR157Q5UAW9 335 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 OR4A47Q6IF82 309 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 CCDC144NLQ6NUI1 221 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 BRD3OSQ6XYD6 125 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 RNF126Q9BV68 326 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 MS4A7Q9GZW8 240 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-203ENST00000397442 FLNAP21333 2647 aaKnown RBP22.11■■□□□ 1.13
CPNE1-203ENST00000397442 VENTXO95231 258 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 IGLV2-23P01705 113 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 CD1BP29016 333 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 ID3Q02535 119 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 HYLS1Q96M11 299 aa22.11■■□□□ 1.13
CPNE1-203ENST00000397442 FAM90A9PA6NNJ1 464 aa22.1■■□□□ 1.13
CPNE1-203ENST00000397442 SCGB1D2O95969 90 aa22.1■■□□□ 1.13
CPNE1-203ENST00000397442 RPS16P62249 146 aaKnown RBP22.1■■□□□ 1.13
CPNE1-203ENST00000397442 C11orf87Q6NUJ2 197 aa22.1■■□□□ 1.13
CPNE1-203ENST00000397442 OR1S1Q8NH92 325 aa22.1■■□□□ 1.13
CPNE1-203ENST00000397442 TEX15Q9BXT5 2789 aa22.1■■□□□ 1.13
CPNE1-203ENST00000397442 TRAV3A0A0B4J244 114 aa22.09■■□□□ 1.13
CPNE1-203ENST00000397442 K7EPK0 472 aa22.09■■□□□ 1.13
CPNE1-203ENST00000397442 SMAD7O15105 426 aaKnown RBP22.09■■□□□ 1.13
CPNE1-203ENST00000397442 NKX2-1P43699 371 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-203ENST00000397442 S100A10P60903 97 aa22.09■■□□□ 1.13
CPNE1-203ENST00000397442 FAM71E2Q8N5Q1 922 aa22.09■■□□□ 1.13
CPNE1-203ENST00000397442 GRPEL2Q8TAA5 225 aa22.09■■□□□ 1.13
CPNE1-203ENST00000397442 NSG2Q9Y328 171 aa22.09■■□□□ 1.13
CPNE1-203ENST00000397442 NOTCH2Q04721 2471 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 NXPH3O95157 252 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 SAA1P0DJI8 122 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-203ENST00000397442 SLC25A4P12235 298 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 RELBQ01201 579 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 FOXRED2Q8IWF2 684 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 PUSL1Q8N0Z8 303 aaKnown RBP22.08■■□□□ 1.13
CPNE1-203ENST00000397442 OR5AC2Q9NZP5 309 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 MBD2Q9UBB5 411 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 ITGB1BP2Q9UKP3 347 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 POMT1Q9Y6A1 747 aa22.08■■□□□ 1.13
CPNE1-203ENST00000397442 LYL1P12980 280 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 ARHGDIBP52566 201 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 AARDQ4LEZ3 155 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 FBLN7Q53RD9 439 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 AIFM2Q9BRQ8 373 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 CTNNBIP1Q9NSA3 81 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-203ENST00000397442 RCL1Q9Y2P8 373 aaKnown RBP22.07■■□□□ 1.12
CPNE1-203ENST00000397442 LSM5Q9Y4Y9 91 aaKnown RBP22.07■■□□□ 1.12
CPNE1-203ENST00000397442 MYO9AB2RTY4 2548 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 ST8SIA3O43173 380 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 LGALS7P47929 136 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 PRSS54Q6PEW0 395 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 BET1LQ9NYM9 111 aa22.07■■□□□ 1.12
CPNE1-203ENST00000397442 FXYD6-FXYD2A0A087WZ82 144 aa22.06■■□□□ 1.12
CPNE1-203ENST00000397442 DEDDO75618 318 aa22.06■■□□□ 1.12
CPNE1-203ENST00000397442 CD24P25063 80 aa22.06■■□□□ 1.12
CPNE1-203ENST00000397442 POLR2GP62487 172 aaKnown RBP eCLIP22.06■■□□□ 1.12
CPNE1-203ENST00000397442 THAP6Q8TBB0 222 aa22.06■■□□□ 1.12
CPNE1-203ENST00000397442 CSPG4Q6UVK1 2322 aa22.06■■□□□ 1.12
CPNE1-203ENST00000397442 A0A0U1RQK1 487 aa22.05■■□□□ 1.12
CPNE1-203ENST00000397442 IGKV1D-33P01593 117 aa22.05■■□□□ 1.12
CPNE1-203ENST00000397442 IGKV1-33P01594 117 aa22.05■■□□□ 1.12
CPNE1-203ENST00000397442 CNTFRP26992 372 aa22.05■■□□□ 1.12
CPNE1-203ENST00000397442 OR2B8PP59922 312 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms