RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TXNL1O43396 289 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 APOA2P02652 100 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 GAPDHP04406 335 aaKnown RBP10.69□□□□□ -0.7
SEC13-209ENST00000397117 HLA-GP17693 338 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 TAGLNQ01995 201 aaKnown RBP10.69□□□□□ -0.7
SEC13-209ENST00000397117 ZNF585BQ52M93 769 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 GGNBP1Q5YKI7 109 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 SLC35G3Q8N808 338 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 ZNF383Q8NA42 475 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 OR4S2Q8NH73 311 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 DPM3Q9P2X0 92 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 TMED3Q9Y3Q3 217 aa10.69□□□□□ -0.7
SEC13-209ENST00000397117 VWFP04275 2813 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 RBFOX2O43251 390 aaKnown RBP eCLIP10.68□□□□□ -0.7
SEC13-209ENST00000397117 OR2A4O95047 310 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 C1QBP02746 253 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 AKR1C2P52895 323 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 H2BFSP57053 126 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 DEFA6Q01524 100 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 DIAPH2-AS1Q14236 149 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 MINOS1Q5TGZ0 78 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 ASB13Q8WXK3 278 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 DDB2Q92466 427 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 RRNAD1Q96FB5 475 aaKnown RBP10.68□□□□□ -0.7
SEC13-209ENST00000397117 OR2A7Q96R45 310 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 MINOS1-NBL1R4GNA1 71 aa10.68□□□□□ -0.7
SEC13-209ENST00000397117 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 H7C2Y5 167 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 HPRT1P00492 218 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 GIPP09681 153 aaPredicted RBP10.67□□□□□ -0.7
SEC13-209ENST00000397117 RRASP10301 218 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 VDAC1P21796 283 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 BRWD1-AS2P59051 145 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 NDUFA5Q16718 116 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 TPTE2P1Q5T6R2 138 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 NOXA1Q86UR1 476 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 C22orf15Q8WYQ4 148 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 NABP2Q9BQ15 211 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 PLEKHA2Q9HB19 425 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 SLC35D1Q9NTN3 355 aa10.67□□□□□ -0.7
SEC13-209ENST00000397117 TBL2Q9Y4P3 447 aaKnown RBP10.67□□□□□ -0.7
SEC13-209ENST00000397117 NOTCH1P46531 2555 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 H0YJW9 148 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 S1PR2O95136 353 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 CRYZL1O95825 349 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 KRASP01116 189 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 MC5RP33032 325 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 RAB13P51153 203 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 RAP2BP61225 183 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 CYCSP99999 105 aaKnown RBP10.66□□□□□ -0.7
SEC13-209ENST00000397117 IAH1Q2TAA2 248 aaPredicted RBP10.66□□□□□ -0.7
SEC13-209ENST00000397117 MIDNQ504T8 468 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 GPR157Q5UAW9 335 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 DHRS7BQ6IAN0 325 aaPredicted RBP10.66□□□□□ -0.7
SEC13-209ENST00000397117 CCDC144NLQ6NUI1 221 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 TREML4Q6UXN2 200 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 MOB3BQ86TA1 216 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 SIGLECL1Q8N7X8 197 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 OR5AN1Q8NGI8 311 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 SEC22AQ96IW7 307 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 GSKIPQ9P0R6 139 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 HILPDAQ9Y5L2 63 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 IGHV1-3A0A0C4DH29 117 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 G3V3Q6 166 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 SMLR1H3BR10 107 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 NPFFO15130 113 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 IGKV1-39P01597 117 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 IGKV1D-39P04432 117 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 ERVK-16P61578 105 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 THOC7Q6I9Y2 204 aaKnown RBP10.66□□□□□ -0.7
SEC13-209ENST00000397117 LHFPL4Q7Z7J7 247 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 LSM10Q969L4 123 aaKnown RBP10.66□□□□□ -0.7
SEC13-209ENST00000397117 R3HDM4Q96D70 268 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 OR10C1Q96KK4 312 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 C2orf50Q96LR7 162 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 SPIN2AQ99865 258 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 SPIN2BQ9BPZ2 258 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 COMMD9Q9P000 198 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 WASHC3Q9Y3C0 194 aa10.66□□□□□ -0.7
SEC13-209ENST00000397117 TRAV40A0A0B4J280 105 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 IGHV1-69DA0A0B4J2H0 117 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 MARCH11A6NNE9 402 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 MPTX1A8MV57 137 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 OOSP1A8MZH6 123 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 IGHV1-69P01742 117 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 NQO2P16083 231 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 G6PCP35575 357 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 ARHGDIBP52566 201 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 SRSF4Q08170 494 aaKnown RBP10.65□□□□□ -0.7
SEC13-209ENST00000397117 SSX2Q16385 188 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 PDPNQ86YL7 162 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 OR8H3Q8N146 312 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 DMBX1Q8NFW5 382 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 OR2T35Q8NGX2 323 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 FLYWCH2Q96CP2 140 aaKnown RBP10.65□□□□□ -0.7
SEC13-209ENST00000397117 MALSU1Q96EH3 234 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 AIFM2Q9BRQ8 373 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 NMES1Q9C002 83 aa10.65□□□□□ -0.7
SEC13-209ENST00000397117 RANBP3Q9H6Z4 567 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms