RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MARCH1Q8TCQ1 289 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 CITED2Q99967 270 aaPredicted RBP11.56□□□□□ -0.56
SEC13-208ENST00000397109 CABLES2Q9BTV7 478 aa11.56□□□□□ -0.56
SEC13-208ENST00000397109 SH2D7A6NKC9 451 aaPredicted RBP11.55□□□□□ -0.56
SEC13-208ENST00000397109 NCBP2LA6PVI3 153 aaKnown RBP11.55□□□□□ -0.56
SEC13-208ENST00000397109 ITGB1BP1O14713 200 aa11.55□□□□□ -0.56
SEC13-208ENST00000397109 CTSDP07339 412 aaPredicted RBP11.55□□□□□ -0.56
SEC13-208ENST00000397109 OR4F17Q8NGA8 305 aa11.55□□□□□ -0.56
SEC13-208ENST00000397109 OR4X2Q8NGF9 303 aa11.55□□□□□ -0.56
SEC13-208ENST00000397109 OR52B4Q8NGK2 314 aa11.55□□□□□ -0.56
SEC13-208ENST00000397109 OR4F4Q96R69 305 aa11.55□□□□□ -0.56
SEC13-208ENST00000397109 TOLLIPQ9H0E2 274 aa11.55□□□□□ -0.56
SEC13-208ENST00000397109 C5orf66Q9H5L9 145 aa11.55□□□□□ -0.56
SEC13-208ENST00000397109 PIPOXQ9P0Z9 390 aa11.55□□□□□ -0.56
SEC13-208ENST00000397109 C14orf166Q9Y224 244 aaKnown RBP11.55□□□□□ -0.56
SEC13-208ENST00000397109 IGKV1D-8A0A087WSZ0 117 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 IGKV1-6A0A0C4DH72 117 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 SCTP09683 121 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 CYCSP99999 105 aaKnown RBP11.54□□□□□ -0.56
SEC13-208ENST00000397109 NDUFA5Q16718 116 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 FAM71F2Q6NXP2 309 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 ODF3L1Q8IXM7 274 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 EDARADDQ8WWZ3 215 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 LIN7CQ9NUP9 197 aaKnown RBP11.54□□□□□ -0.56
SEC13-208ENST00000397109 SLC23A1Q9UHI7 598 aa11.54□□□□□ -0.56
SEC13-208ENST00000397109 OR5H14A6NHG9 310 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 DBX1A6NMT0 343 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 RAB29O14966 203 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 HSPA12AO43301 675 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 SFT2D2O95562 160 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 IGHG2P01859 326 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 PPP1R1AQ13522 171 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 HIST2H2BDQ6DRA6 164 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 ZNF833PQ6ZTB9 187 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 SLC35E3Q7Z769 313 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 FOXRED2Q8IWF2 684 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 OR5M8Q8NGP6 311 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 COQ8AQ8NI60 647 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 MAFIPQ8WZ33 124 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 R3HDM4Q96D70 268 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 S1PR3Q99500 378 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 RASL11BQ9BPW5 248 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 ZNF2Q9BSG1 426 aaPredicted RBP11.53□□□□□ -0.56
SEC13-208ENST00000397109 RTBDNQ9BSG5 229 aaPredicted RBP11.53□□□□□ -0.56
SEC13-208ENST00000397109 TSSC4Q9Y5U2 329 aaPredicted RBP11.53□□□□□ -0.56
SEC13-208ENST00000397109 NOTCH1P46531 2555 aa11.53□□□□□ -0.56
SEC13-208ENST00000397109 NOTCH3Q9UM47 2321 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 TRBV6-7A0A0A0MS04 114 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 TCRBV4S1A1TA0A5B7 111 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 PSMB11A5LHX3 300 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 AKR1C4P17516 323 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 CEACAM6P40199 344 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 IFITM2Q01629 132 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 C9orf62Q8N4C0 152 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 Q8N9W7 124 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 UXS1Q8NBZ7 420 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 NABP2Q9BQ15 211 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.56
SEC13-208ENST00000397109 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 PLSCR3Q9NRY6 295 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 KCNIP3Q9Y2W7 256 aa11.52□□□□□ -0.56
SEC13-208ENST00000397109 SAA2-SAA4A0A096LPE2 208 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 PIGBOS1A0A0B4J2F0 54 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 ADARB2-AS1A8MUL3 147 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 GOSR2O14653 212 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 KCNAB3O43448 404 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 SAA2P0DJI9 122 aaPredicted RBP11.51□□□□□ -0.57
SEC13-208ENST00000397109 H2BFSP57053 126 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 SLC35B1P78383 322 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 IGSF11Q5DX21 431 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 LAMTOR1Q6IAA8 161 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 SGPP2Q8IWX5 399 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 SLC38A6Q8IZM9 456 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 MOB3AQ96BX8 217 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 HSPB11Q9Y547 144 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 AP4M1O00189 453 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 ST8SIA5O15466 376 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 PGAM2P15259 253 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 VAMP1P23763 118 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 TCTEX1D4Q5JR98 221 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 TMEM65Q6PI78 240 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 COMMD1Q8N668 190 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 ADAD2Q8NCV1 583 aaKnown RBP11.51□□□□□ -0.57
SEC13-208ENST00000397109 OR11H4Q8NGC9 324 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 TMEM230Q96A57 120 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 GALNT14Q96FL9 552 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 OR1A1Q9P1Q5 309 aa11.51□□□□□ -0.57
SEC13-208ENST00000397109 PLXNB1O43157 2135 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 G3V3Q6 166 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 SMLR1H3BR10 107 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 NFYAP23511 347 aaPredicted RBP11.5□□□□□ -0.57
SEC13-208ENST00000397109 GPR12P47775 334 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 F2RL1P55085 397 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 DEFA6Q01524 100 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 MMDQ15546 238 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 ZNF767PQ75MW2 155 aa11.5□□□□□ -0.57
SEC13-208ENST00000397109 H1FOOQ8IZA3 346 aaPredicted RBP11.5□□□□□ -0.57
SEC13-208ENST00000397109 STPG2Q8N412 459 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms