RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MESTQ5EB52 335 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 DMKNQ6E0U4 476 aaPredicted RBP8.96□□□□□ -0.98
COL4A4-201ENST00000396625 C17orf99Q6UX52 265 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 TP53I13Q8NBR0 393 aaPredicted RBP8.96□□□□□ -0.98
COL4A4-201ENST00000396625 SYNGR3O43761 229 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 LCN2P80188 198 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 SCGB3A1Q96QR1 104 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 C1QL1O75973 258 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 PLXNA2O75051 1894 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 ATP5LO75964 103 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 EFNB2P52799 333 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 HIKESHIQ53FT3 197 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 ACER2Q5QJU3 275 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 MMD2Q8IY49 270 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 PCDH15Q96QU1 1955 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 FNDC4Q9H6D8 234 aaPredicted RBP8.96□□□□□ -0.98
COL4A4-201ENST00000396625 ZFP64Q9NPA5 681 aa8.96□□□□□ -0.98
COL4A4-201ENST00000396625 CENPWQ5EE01 88 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 MS4A4AQ96JQ5 239 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 TNFRSF18Q9Y5U5 241 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 SAA1P0DJI8 122 aaPredicted RBP8.95□□□□□ -0.98
COL4A4-201ENST00000396625 TAF1LQ8IZX4 1826 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 TICRRQ7Z2Z1 1910 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 TRBV5-4A0A0C4DH59 114 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 AGFG2O95081 481 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 SLC25A53Q5H9E4 307 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 DCAF12L2Q5VW00 463 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 NKX2-2O95096 273 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 FOXC1Q12948 553 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 FAM159AQ6UWV7 190 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 SPSB4Q96A44 273 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 MGST2Q99735 147 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 GSN-AS1Q9NRJ2 163 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 hCG_38984A0A1B0GV85 526 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 SRSF6Q13247 344 aaKnown RBP8.95□□□□□ -0.98
COL4A4-201ENST00000396625 KIR3DL3Q8N743 410 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 TOMM7Q9P0U1 55 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 FRMPD3Q5JV73 1810 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 FOXI3A8MTJ6 420 aaPredicted RBP8.95□□□□□ -0.98
COL4A4-201ENST00000396625 CA11O75493 328 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 GOLT1AQ6ZVE7 132 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 PRR7Q8TB68 274 aa8.95□□□□□ -0.98
COL4A4-201ENST00000396625 WNT2BQ93097 391 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 OGG1O15527 345 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 RPL27AP46776 148 aaKnown RBP8.94□□□□□ -0.98
COL4A4-201ENST00000396625 SOX8P57073 446 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 TTC9CQ8N5M4 171 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 CLDN14O95500 239 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 AGRNO00468 2067 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 REG1AP05451 166 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 HOGA1Q86XE5 327 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 RBM38Q9H0Z9 239 aaKnown RBP8.94□□□□□ -0.98
COL4A4-201ENST00000396625 GGTLC3B5MD39 225 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 CEACAM5P06731 702 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 PRR35P0CG20 571 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 PF4V1P10720 104 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 CADM4Q8NFZ8 388 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 LIPT2A6NK58 231 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 MPTX1A8MV57 137 aa8.94□□□□□ -0.98
COL4A4-201ENST00000396625 H3BUT2 72 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 LEPP41159 167 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 SFTA2Q6UW10 78 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 TMEM106BQ9NUM4 274 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 ID4P47928 161 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 VEGFBP49765 207 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 CRPP02741 224 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 ATP5G2Q06055 141 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 J3QT63 122 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 ACSF3Q4G176 576 aaPredicted RBP8.93□□□□□ -0.98
COL4A4-201ENST00000396625 OR51G1Q8NGK1 321 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 CITED1Q99966 193 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 WDR54Q9H977 334 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 CYSLTR1Q9Y271 337 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 SLC25A15Q9Y619 301 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 SRFP11831 508 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 PNLIPP16233 465 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 FAM106AQ4KMX7 169 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 TAF15Q92804 592 aaKnown RBP eCLIP8.93□□□□□ -0.98
COL4A4-201ENST00000396625 MS4A6AQ9H2W1 248 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 SPG11Q96JI7 2443 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 PGPA6NDG6 321 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 MAJINQ3KP22 176 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 NXT2Q9NPJ8 142 aaKnown RBP8.93□□□□□ -0.98
COL4A4-201ENST00000396625 DSCAML1Q8TD84 2053 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 NMBP08949 121 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 RNF182Q8N6D2 247 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 R4GN57 208 aa8.93□□□□□ -0.98
COL4A4-201ENST00000396625 CD1AP06126 327 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 ZNF71Q9NQZ8 489 aaPredicted RBP8.92□□□□□ -0.98
COL4A4-201ENST00000396625 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 MARCH11A6NNE9 402 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 GPR6P46095 362 aaPredicted RBP8.92□□□□□ -0.98
COL4A4-201ENST00000396625 LDLRAD2Q5SZI1 272 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 APOHP02749 345 aaPredicted RBP8.92□□□□□ -0.98
COL4A4-201ENST00000396625 LINC00614P0C842 121 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 MC5RP33032 325 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 OR4D11Q8NGI4 311 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 M0R381 172 aa8.92□□□□□ -0.98
COL4A4-201ENST00000396625 CRYBB3P26998 211 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms