RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 VDAC1P21796 283 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 NPPCP23582 126 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 TGFBR3Q03167 851 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 KIAA1644Q3SXP7 199 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 FAM53AQ6NSI3 398 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-204ENST00000394164 ACSM6Q6P461 480 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 ANAPC16Q96DE5 110 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 STARD4Q96DR4 205 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 PRDM14Q9GZV8 571 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 RBM7Q9Y580 266 aaKnown RBP8.38□□□□□ -1.07
PSEN1-204ENST00000394164 USF3Q68DE3 2245 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 NBASA2RRP1 2371 aa8.38□□□□□ -1.07
PSEN1-204ENST00000394164 ANKRD30BLA7E2S9 258 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 TMEM11P17152 192 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 SRP14P37108 136 aaKnown RBP8.37□□□□□ -1.07
PSEN1-204ENST00000394164 KLF3P57682 345 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-204ENST00000394164 SRPXP78539 464 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 KRTAP27-1Q3LI81 207 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 Q6ZSR3 168 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 POM121L2Q96KW2 1035 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 TMEM56Q96MV1 263 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 TMEM56-RWDD3S4R434 201 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 CEP295Q9C0D2 2601 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 ADGRG4Q8IZF6 3080 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 IGKV1-6A0A0C4DH72 117 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 SLC22A20A6NK97 555 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 KLRC4-KLRK1H3BQV0 150 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 NDUFB4O95168 129 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 NAPSAO96009 420 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 COMPP49747 757 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-204ENST00000394164 SOX8P57073 446 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 RANP62826 216 aaKnown RBP8.37□□□□□ -1.07
PSEN1-204ENST00000394164 VAMP3Q15836 100 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 CEACAM21Q3KPI0 293 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 ZNF766Q5HY98 468 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 CLEC2AQ6UVW9 174 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 ASCL4Q6XD76 172 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 WIPI2Q9Y4P8 454 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 IGKV3D-15A0A087WSY6 115 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 KIAA1324LA8MWY0 1029 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-204ENST00000394164 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 SLC17A3O00476 420 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 SERPINE2P07093 398 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 UBE2V1Q13404 147 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 SIGLECL1Q8N7X8 197 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 OR1A1Q9P1Q5 309 aa8.37□□□□□ -1.07
PSEN1-204ENST00000394164 TRGV5A0A0B4J1U4 118 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 CDIPTO14735 213 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 HYPMO75409 117 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 CD46P15529 392 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 ATP5G3P48201 142 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 SLC35B1P78383 322 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 LDLRAD2Q5SZI1 272 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 COLCA1Q6ZS62 124 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 DEFB124Q8NES8 71 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 SPSB4Q96A44 273 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 TMEM45BQ96B21 275 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 PLPPR2Q96GM1 343 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 TRIB1Q96RU8 372 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 AGMATQ9BSE5 352 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 PPP1R3CQ9UQK1 317 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 YLPM1P49750 1951 aaKnown RBP8.36□□□□□ -1.07
PSEN1-204ENST00000394164 TNRC6AQ8NDV7 1962 aaKnown RBP8.36□□□□□ -1.07
PSEN1-204ENST00000394164 RBFOX2O43251 390 aaKnown RBP eCLIP8.36□□□□□ -1.07
PSEN1-204ENST00000394164 TYMSP04818 313 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 WNT2P09544 360 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 IER3P46695 156 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 LRRC75BQ2VPJ9 315 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 FBLN7Q53RD9 439 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 TMEM211Q6ICI0 200 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 ZNF826PQ6ZT77 177 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 OR10G9Q8NGN4 311 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 OR10G7Q8NGN6 311 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 OR5P3Q8WZ94 311 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 NEIL1Q96FI4 390 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-204ENST00000394164 LOXL4Q96JB6 756 aa8.36□□□□□ -1.07
PSEN1-204ENST00000394164 WDR61Q9GZS3 305 aaKnown RBP8.36□□□□□ -1.07
PSEN1-204ENST00000394164 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
PSEN1-204ENST00000394164 ANKRD11Q6UB99 2663 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-204ENST00000394164 C21orf140B9A014 251 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 COL8A2P25067 703 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 UBE2NP61088 152 aaKnown RBP8.35□□□□□ -1.07
PSEN1-204ENST00000394164 FGF12P61328 243 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 ZNF90Q03938 601 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 TRIP6Q15654 476 aaKnown RBP8.35□□□□□ -1.07
PSEN1-204ENST00000394164 SPINK9Q5DT21 86 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 LCN12Q6JVE5 192 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 LINC01551Q86U37 167 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 FAM19A2Q8N3H0 131 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 TAF15Q92804 592 aaKnown RBP eCLIP8.35□□□□□ -1.07
PSEN1-204ENST00000394164 ELOVL5Q9NYP7 299 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 ZNF391Q9UJN7 358 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 KCNS2Q9ULS6 477 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 KLF13Q9Y2Y9 288 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-204ENST00000394164 TBL2Q9Y4P3 447 aaKnown RBP8.35□□□□□ -1.07
PSEN1-204ENST00000394164 TPRP12270 2363 aaKnown RBP8.35□□□□□ -1.07
PSEN1-204ENST00000394164 PLCE1Q9P212 2302 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 FCN1O00602 326 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 SYNGR2O43760 224 aa8.35□□□□□ -1.07
PSEN1-204ENST00000394164 CLDN1O95832 211 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms