RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TRAV38-1A0A0B4J264 116 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 hADV38S2A0JD32 116 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 SHISA9B4DS77 424 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 NDUFA2O43678 99 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 MMP23AO75900 390 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 IGKV1D-33P01593 117 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 IGKV1-33P01594 117 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 SNRNP70P08621 437 aaKnown RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 TMPRSS3P57727 454 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 OR2B8PP59922 312 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 ERVK-16P61578 105 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 TLE1Q04724 770 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 ZNF787Q6DD87 383 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 SLC25A48Q6ZT89 311 aaKnown RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 ZCCHC24Q8N2G6 241 aaKnown RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 RPP25LQ8N5L8 163 aaKnown RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 OR10A7Q8NGE5 316 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 RXFP4Q8TDU9 374 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 ADTRPQ96IZ2 230 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 CLCC1Q96S66 551 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 SAP30LQ9HAJ7 183 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 A0A1W2PPE3 182 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 NKX6-3A6NJ46 265 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 TMEM178BH3BS89 294 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 M0R036 132 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 TNFRSF13BO14836 293 aaPredicted RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 ATXN7O15265 892 aaPredicted RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 TMPRSS2O15393 492 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 FCN3O75636 299 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 IFNA17P01571 189 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 FOLR2P14207 255 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 AKR1C3P42330 323 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 VDAC2P45880 294 aaPredicted RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 THBS3P49746 956 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 MRPS11P82912 194 aaKnown RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 MEF2CQ06413 473 aaPredicted RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 POU2AF1Q16633 256 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 SPINK9Q5DT21 86 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 NCMAPQ5T1S8 102 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 SSX9Q7RTT3 188 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 DMRTC2Q8IXT2 367 aaPredicted RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 C1orf87Q8N0U7 546 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 VKORC1L1Q8N0U8 176 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 ZNF383Q8NA42 475 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 OR4A16Q8NH70 328 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 RNASE6Q93091 150 aaKnown RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 TMEM140Q9NV12 185 aa7.44□□□□□ -1.22
TDP1-202ENST00000393452 CISD1Q9NZ45 108 aaKnown RBP7.44□□□□□ -1.22
TDP1-202ENST00000393452 SPTA1P02549 2419 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 TRAV3A0A0B4J244 114 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 VSTM5A8MXK1 200 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 CRYBA1P05813 215 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 BCL2P10415 239 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 FGF7P21781 194 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 AKIRIN2Q53H80 203 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 ACSM6Q6P461 480 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 LCN15Q6UWW0 184 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 LYG1Q8N1E2 194 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 ZCCHC14Q8WYQ9 949 aaKnown RBP7.43□□□□□ -1.22
TDP1-202ENST00000393452 RHOVQ96L33 236 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 C20orf24Q9BUV8 137 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 NPCDR1Q9BY65 106 aa7.43□□□□□ -1.22
TDP1-202ENST00000393452 SLC25A10Q9UBX3 287 aaPredicted RBP7.43□□□□□ -1.22
TDP1-202ENST00000393452 TRGV8A0A0C4DH27 118 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 MAP1LC3B2A6NCE7 125 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 C15orf61A6NNL5 157 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 PRSS46E5RG02 174 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 E7EQL1 145 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 UCNP55089 124 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 ELLP55199 621 aaPredicted RBP7.42□□□□□ -1.22
TDP1-202ENST00000393452 RPP30P78346 268 aaKnown RBP7.42□□□□□ -1.22
TDP1-202ENST00000393452 AVPI1Q5T686 147 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 Q8N7P7 452 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 MAP1LC3BQ9GZQ8 125 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 GNG13Q9P2W3 67 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 MLXQ9UH92 298 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 FOXA2Q9Y261 457 aaPredicted RBP7.42□□□□□ -1.22
TDP1-202ENST00000393452 PUS1Q9Y606 427 aaKnown RBP eCLIP7.42□□□□□ -1.22
TDP1-202ENST00000393452 PPIAL4EA0A075B759 164 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 PPIAL4DF5H284 164 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 H3BQ15 152 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 MBP02144 154 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 IL6RP08887 468 aaPredicted RBP7.42□□□□□ -1.22
TDP1-202ENST00000393452 FBP1P09467 338 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 PPIAL4FP0DN26 164 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 NDUFB7P17568 137 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 RPL31P62899 125 aaKnown RBP7.42□□□□□ -1.22
TDP1-202ENST00000393452 TFF3Q07654 80 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 OR4A47Q6IF82 309 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 HEPN1Q6WQI6 88 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 HIST1H2BAQ96A08 127 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 P2RX4Q99571 388 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 GGACTQ9BVM4 153 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 GAL3ST2Q9H3Q3 398 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 TMEM14BQ9NUH8 114 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 TMEM106BQ9NUM4 274 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 TCF19Q9Y242 345 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 WDR83OSQ9Y284 106 aa7.42□□□□□ -1.22
TDP1-202ENST00000393452 PPIAL4AQ9Y536 164 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms