RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 GRPP07492 148 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 HIST1H1EP10412 219 aaKnown RBP6.87□□□□□ -1.31
LIMS1-203ENST00000393310 GCSHP23434 173 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 MRPL2Q5T653 305 aaKnown RBP6.87□□□□□ -1.31
LIMS1-203ENST00000393310 C9orf153Q5TBE3 101 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 C1orf195Q5TG92 126 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 DOK3Q7L591 496 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 SDF2Q99470 211 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 HIVEP3Q5T1R4 2406 aa6.87□□□□□ -1.31
LIMS1-203ENST00000393310 IGHV4-30-2A0A087WSY4 118 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 A0A1B0GTI1 187 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 ARL6IP5O75915 188 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 IGHMP01871 453 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 SEMG1P04279 462 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 TRGC1P0CF51 173 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 FGF9P31371 208 aaPredicted RBP6.86□□□□□ -1.31
LIMS1-203ENST00000393310 CEACAM6P40199 344 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 SYPL1Q16563 259 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 TSPO2Q5TGU0 170 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 EPGNQ6UW88 154 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 H1FOOQ8IZA3 346 aaPredicted RBP6.86□□□□□ -1.31
LIMS1-203ENST00000393310 LYG1Q8N1E2 194 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 OR1S1Q8NH92 325 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 DYNLRB2Q8TF09 96 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 RAB37Q96AX2 223 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 ATOH8Q96SQ7 321 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 CHD7Q9P2D1 2997 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 FN1P02751 2386 aaKnown RBP6.86□□□□□ -1.31
LIMS1-203ENST00000393310 TCRBV3S1A0A5B6 114 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 H3BMH7 237 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 FAM106CPP0CH98 169 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 LAMP1P11279 417 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 TNFRSF1BP20333 461 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 GRB2P62993 217 aaKnown RBP6.86□□□□□ -1.31
LIMS1-203ENST00000393310 HOXC5Q00444 222 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF117Q03924 483 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 ELOBQ15370 118 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 MEIG1Q5JSS6 88 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 MBOAT2Q6ZWT7 520 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 GBGT1Q8N5D6 347 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 SLC16A11Q8NCK7 471 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 NUDCD2Q8WVJ2 157 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 ATP5SQ99766 215 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 C20orf144Q9BQM9 153 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 ABRACLQ9P1F3 81 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 CACNA1CQ13936 2221 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 DPRXA6NFQ7 191 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 NPIPB5A8MRT5 1133 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 ACOT8O14734 319 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 TAAR5O14804 337 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 RBMXP38159 391 aaKnown RBP6.86□□□□□ -1.31
LIMS1-203ENST00000393310 PCLAFQ15004 111 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF841Q6ZN19 808 aa6.86□□□□□ -1.31
LIMS1-203ENST00000393310 HOXB13Q92826 284 aaPredicted RBP6.86□□□□□ -1.31
LIMS1-203ENST00000393310 XRCC3O43542 346 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 PSMB3P49720 205 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 EDDM3BP56851 147 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 KRTAP10-9P60411 292 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 GLYATL3Q5SZD4 288 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 NHLRC1Q6VVB1 395 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 TIFABQ6ZNK6 161 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 HIST3H2BBQ8N257 126 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 GEMIN6Q8WXD5 167 aaKnown RBP6.85□□□□□ -1.31
LIMS1-203ENST00000393310 YIPF6Q96EC8 236 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF747Q9BV97 191 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 OR2H1Q9GZK4 316 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 EGLN3Q9H6Z9 239 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 USP24Q9UPU5 2620 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 PCM1Q15154 2024 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 IGHV2-70DA0A0C4DH43 119 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 IGSF23A1L1A6 192 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 HTR1AP08908 422 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 LCN8Q6JVE9 175 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 CD200R1LQ6Q8B3 271 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 NR2C2APQ86WQ0 139 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.85□□□□□ -1.31
LIMS1-203ENST00000393310 EEF1AKMT3Q96AZ1 226 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 RASL11BQ9BPW5 248 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 RBKSQ9H477 322 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 A0A1B0GWB2 263 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 TMEM129A0AVI4 362 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 C10orf142B7Z368 130 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 UPK1AO00322 258 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 TMPRSS2O15393 492 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 RS1O15537 224 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 NHLRC4P0CG21 123 aaPredicted RBP6.85□□□□□ -1.31
LIMS1-203ENST00000393310 HILS1P60008 231 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 CLDND2Q8NHS1 167 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 FLVCR1-AS1Q8TAF5 88 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 TSSK2Q96PF2 358 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 TRAPPC1Q9Y5R8 145 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 KBTBD11-OT1A0A1B0GTJ5 212 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 PINLYPA6NC86 204 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 MPC2O95563 127 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 CFPP27918 469 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 UCP3P55916 312 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 TAS2R20P59543 309 aa6.85□□□□□ -1.31
LIMS1-203ENST00000393310 ZNF141Q15928 474 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms