RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 OR5B12Q96R08 314 aa9.48□□□□□ -0.89
PDCD4-202ENST00000393104 RIMS4Q9H426 269 aaPredicted RBP9.48□□□□□ -0.89
PDCD4-202ENST00000393104 FOXJ2Q9P0K8 574 aa9.48□□□□□ -0.89
PDCD4-202ENST00000393104 WDR83OSQ9Y284 106 aa9.48□□□□□ -0.89
PDCD4-202ENST00000393104 TRAPPC2LH3BP13 241 aa9.48□□□□□ -0.89
PDCD4-202ENST00000393104 SLC17A3O00476 420 aa9.48□□□□□ -0.89
PDCD4-202ENST00000393104 IFNA1P01562 189 aa9.48□□□□□ -0.89
PDCD4-202ENST00000393104 SPATA46Q5T0L3 261 aa9.48□□□□□ -0.89
PDCD4-202ENST00000393104 OR5T1Q8NG75 326 aa9.48□□□□□ -0.89
PDCD4-202ENST00000393104 CA6P23280 308 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 CEBPDP49716 269 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-202ENST00000393104 THBS3P49746 956 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 SSR4P51571 173 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 ST6GALNAC3Q8NDV1 305 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 V9GYV3 84 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 CLDN1O95832 211 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 UBE2G2P60604 165 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 ALKBH6Q3KRA9 238 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 MGST2Q99735 147 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 KRASP01116 189 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 SP1P08047 785 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 FTH1P19P0C7X4 201 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 PTTG1IPP53801 180 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 PCBD1P61457 104 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 Q0VG73 95 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 C11orf53Q8IXP5 236 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 MKXQ8IYA7 352 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
PDCD4-202ENST00000393104 PSMF1Q92530 271 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 UHRF2Q96PU4 802 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 HES4Q9HCC6 221 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 PRR14LQ5THK1 2151 aa9.47□□□□□ -0.89
PDCD4-202ENST00000393104 CCL25O15444 150 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 ZNF146Q15072 292 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 MAJINQ3KP22 176 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 SPATA31B1PQ5VZV4 182 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 NIT1Q86X76 327 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 HSPB9Q9BQS6 159 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 SFXN3Q9BWM7 321 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 LINC00470Q9BZP3 86 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 MSL2Q9HCI7 577 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 KCNIP2Q9NS61 270 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 LSM4Q9Y4Z0 139 aaKnown RBP9.46□□□□□ -0.89
PDCD4-202ENST00000393104 FOXH1O75593 365 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 OR9G9P0C7N8 305 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 PPP1CBP62140 327 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 TREML4Q6UXN2 200 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 SPATA12Q7Z6I5 190 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 CMTM2Q8TAZ6 248 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 COL25A1Q9BXS0 654 aaPredicted RBP9.46□□□□□ -0.89
PDCD4-202ENST00000393104 PAM16Q9Y3D7 125 aa9.46□□□□□ -0.89
PDCD4-202ENST00000393104 GPX1P07203 203 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 STAG3L2P0CL84 134 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 STAG3L3P0CL85 134 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 CLDN18P56856 261 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 MMDQ15546 238 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 FAM180AQ6UWF9 173 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 RPS19BP1Q86WX3 136 aaKnown RBP9.46□□□□□ -0.9
PDCD4-202ENST00000393104 ZNF645Q8N7E2 425 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 COQ2Q96H96 371 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 GNB4Q9HAV0 340 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 LIN7CQ9NUP9 197 aaKnown RBP9.46□□□□□ -0.9
PDCD4-202ENST00000393104 CACNA1DQ01668 2161 aa9.46□□□□□ -0.9
PDCD4-202ENST00000393104 C12orf77C9JDV5 145 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 NEURL1O76050 574 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 IGLV2-8P01709 118 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 MBP02144 154 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 CCNOP22674 350 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 ZNF816Q0VGE8 651 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-202ENST00000393104 ASPHD1Q5U4P2 390 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 TUSC5Q8IXB3 177 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 OR52L2PQ8NGH6 319 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 DTD1Q8TEA8 209 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 QTRT1Q9BXR0 403 aaKnown RBP9.45□□□□□ -0.9
PDCD4-202ENST00000393104 OPN3Q9H1Y3 402 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-202ENST00000393104 SVEP1Q4LDE5 3571 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 CDC34P49427 236 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-202ENST00000393104 TMPRSS3P57727 454 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 ATP6V1FQ16864 119 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 TOMM20LQ6UXN7 152 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 ZNF705AQ6ZN79 300 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-202ENST00000393104 SCCPDHQ8NBX0 429 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 KCNE4Q8WWG9 221 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 ZNF503Q96F45 646 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 PKIBQ9C010 78 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 DSCAML1Q8TD84 2053 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 LOC105371242A0A075B767 164 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 M0QZK8 103 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 SIRPB1O00241 398 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 AQP7O14520 342 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 PDE6DO43924 150 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 PDLIM3Q53GG5 364 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-202ENST00000393104 DHRS13Q6UX07 377 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 VN1R17PQ8TDU5 208 aa9.45□□□□□ -0.9
PDCD4-202ENST00000393104 MRPL18Q9H0U6 180 aaKnown RBP9.45□□□□□ -0.9
PDCD4-202ENST00000393104 SEPSECSQ9HD40 501 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms