RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RHOVQ96L33 236 aa17.41■□□□□ 0.38
SPHK1-202ENST00000392496 FLNCQ14315 2725 aa17.41■□□□□ 0.38
SPHK1-202ENST00000392496 METTL15P1P0C7V9 234 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 EFNA4P52798 201 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 SPCS3P61009 180 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 HBG1P69891 147 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 HBG2P69892 147 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 BLOC1S1P78537 153 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 PDLIM3Q53GG5 364 aaPredicted RBP17.4■□□□□ 0.38
SPHK1-202ENST00000392496 TOR2AQ5JU69 321 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 ZNF429Q86V71 674 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 VKORC1L1Q8N0U8 176 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 ST6GALNAC6Q969X2 333 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 MRPL20Q9BYC9 149 aaKnown RBP17.4■□□□□ 0.38
SPHK1-202ENST00000392496 CEBPZOSA8MTT3 80 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 APOA2P02652 100 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 IL3RAP26951 378 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 OR2B8PP59922 312 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 OR5AN1Q8NGI8 311 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 AIFM2Q9BRQ8 373 aa17.4■□□□□ 0.38
SPHK1-202ENST00000392496 DOPEY1Q5JWR5 2465 aa17.39■□□□□ 0.37
SPHK1-202ENST00000392496 TEX46H3BTG2 121 aa17.39■□□□□ 0.37
SPHK1-202ENST00000392496 LIPFP07098 398 aa17.39■□□□□ 0.37
SPHK1-202ENST00000392496 GPR6P46095 362 aaPredicted RBP17.39■□□□□ 0.37
SPHK1-202ENST00000392496 RAB5CP51148 216 aa17.39■□□□□ 0.37
SPHK1-202ENST00000392496 GNB2P62879 340 aa17.39■□□□□ 0.37
SPHK1-202ENST00000392496 OR4A47Q6IF82 309 aa17.39■□□□□ 0.37
SPHK1-202ENST00000392496 HAPLN4Q86UW8 402 aa17.39■□□□□ 0.37
SPHK1-202ENST00000392496 OR13D1Q8NGV5 346 aa17.39■□□□□ 0.37
SPHK1-202ENST00000392496 STRAPQ9Y3F4 350 aaKnown RBP17.39■□□□□ 0.37
SPHK1-202ENST00000392496 hCG_1809904A0A1W2PP81 198 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 A0A1W2PPE2 198 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 A0A1W2PR64 198 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 A0A1W2PRV1 198 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 A8MXK9 166 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 NUDT19A8MXV4 375 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 IFNA17P01571 189 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 ATP6V0CP27449 155 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 ARL16Q0P5N6 197 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 ZDHHC16Q969W1 377 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 MARC2Q969Z3 335 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 GNPNAT1Q96EK6 184 aaPredicted RBP17.38■□□□□ 0.37
SPHK1-202ENST00000392496 TSNAXQ99598 290 aaKnown RBP17.38■□□□□ 0.37
SPHK1-202ENST00000392496 NABP2Q9BQ15 211 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 SH3BGRL3Q9H299 93 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 PARP11Q9NR21 331 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 MALRD1Q5VYJ5 2156 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 TRAV3A0A0B4J244 114 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 C15orf61A6NNL5 157 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 H0YJW9 148 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 IFNA5P01569 189 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 IL6RP08887 468 aaPredicted RBP17.38■□□□□ 0.37
SPHK1-202ENST00000392496 PRRX1P54821 245 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 SRSF1Q07955 248 aaKnown RBP eCLIP17.38■□□□□ 0.378e-8■■□□□ 14
SPHK1-202ENST00000392496 ZNF525Q8N782 197 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 OSR1Q8TAX0 266 aaPredicted RBP17.38■□□□□ 0.37
SPHK1-202ENST00000392496 OR4C12Q96R67 309 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 PCGF1Q9BSM1 259 aa17.38■□□□□ 0.37
SPHK1-202ENST00000392496 IGHV2-26A0A0B4J1V2 119 aa17.37■□□□□ 0.37
SPHK1-202ENST00000392496 RAB19A4D1S5 217 aa17.37■□□□□ 0.37
SPHK1-202ENST00000392496 C22orf46C9J442 243 aa17.37■□□□□ 0.37
SPHK1-202ENST00000392496 OVOL3O00110 214 aa17.37■□□□□ 0.37
SPHK1-202ENST00000392496 PXDC1Q5TGL8 231 aa17.37■□□□□ 0.37
SPHK1-202ENST00000392496 SSBP3Q9BWW4 388 aaPredicted RBP17.37■□□□□ 0.37
SPHK1-202ENST00000392496 FOXA2Q9Y261 457 aaPredicted RBP17.37■□□□□ 0.37
SPHK1-202ENST00000392496 HELZ2Q9BYK8 2649 aaKnown RBP17.37■□□□□ 0.37
SPHK1-202ENST00000392496 USP9XQ93008 2570 aaPredicted RBP17.36■□□□□ 0.37
SPHK1-202ENST00000392496 NDUFS7O75251 213 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 SCAF4O95104 1147 aaKnown RBP17.36■□□□□ 0.37
SPHK1-202ENST00000392496 IGKV1-16P04430 117 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 TLE4Q04727 773 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 TMEM177Q53S58 311 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 TGIF2LXQ8IUE1 241 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 CLCC1Q96S66 551 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 CLEC7AQ9BXN2 247 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 MMP26Q9NRE1 261 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 NUP50Q9UKX7 468 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 LRRK2Q5S007 2527 aa17.36■□□□□ 0.37
SPHK1-202ENST00000392496 IGLV1-47P01700 117 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 ATP6V1FQ16864 119 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 Q6ZRG5 221 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 PDPNQ86YL7 162 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 LILRB2Q8N423 598 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 BEND2Q8NDZ0 799 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 OR2G3Q8NGZ4 309 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 PARD6GQ9BYG4 376 aaPredicted RBP17.35■□□□□ 0.37
SPHK1-202ENST00000392496 TMEM14BQ9NUH8 114 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 LRBAP50851 2863 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 PMS2P5A8MQ11 134 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 H7C2Y5 167 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 REG1BP48304 166 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 SLC38A11Q08AI6 406 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 HLA-DRB5Q30154 266 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 SPINK9Q5DT21 86 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 IL34Q6ZMJ4 242 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 SPOCK3Q9BQ16 436 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 BET1LQ9NYM9 111 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 TCF19Q9Y242 345 aa17.35■□□□□ 0.37
SPHK1-202ENST00000392496 LOC105371242A0A075B767 164 aa17.34■□□□□ 0.37
SPHK1-202ENST00000392496 UMAD1C9J7I0 102 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms