RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 HIF1ANQ9NWT6 349 aa21.68■■□□□ 1.06
MSX1-201ENST00000382723 RCL1Q9Y2P8 373 aaKnown RBP21.68■■□□□ 1.06
MSX1-201ENST00000382723 FASNP49327 2511 aaKnown RBP21.67■■□□□ 1.06
MSX1-201ENST00000382723 SHOXO15266 292 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 TXNL1O43396 289 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 RBMXL2O75526 392 aaKnown RBP21.67■■□□□ 1.06
MSX1-201ENST00000382723 HRASP01112 189 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 UBE2E1P51965 193 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 TMEM65Q6PI78 240 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 PDPNQ86YL7 162 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 FLYWCH2Q96CP2 140 aaKnown RBP21.67■■□□□ 1.06
MSX1-201ENST00000382723 MFFQ9GZY8 342 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 TNFSF18Q9UNG2 199 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 CSMD1Q96PZ7 3565 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 OR9G9P0C7N8 305 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 MC5RP33032 325 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 ID3Q02535 119 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 MIDNQ504T8 468 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 LINC01356Q8N9X3 169 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 C1orf159Q96HA4 380 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 ZFP57Q9NU63 452 aa21.67■■□□□ 1.06
MSX1-201ENST00000382723 SRRM4A7MD48 611 aaKnown RBP21.66■■□□□ 1.06
MSX1-201ENST00000382723 L7N2F9 121 aa21.66■■□□□ 1.06
MSX1-201ENST00000382723 RAB13P51153 203 aa21.66■■□□□ 1.06
MSX1-201ENST00000382723 HARBI1Q96MB7 349 aa21.66■■□□□ 1.06
MSX1-201ENST00000382723 PAIP2BQ9ULR5 123 aaKnown RBP21.66■■□□□ 1.06
MSX1-201ENST00000382723 AUP1Q9Y679 476 aa21.66■■□□□ 1.06
MSX1-201ENST00000382723 A0A1W2PPI3 338 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 SSSCA1O60232 199 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 LYL1P12980 280 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 OR2B8PP59922 312 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 RPS16P62249 146 aaKnown RBP21.65■■□□□ 1.06
MSX1-201ENST00000382723 SSX2Q16385 188 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 OR4A47Q6IF82 309 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 C17orf50Q8WW18 174 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.65■■□□□ 1.06
MSX1-201ENST00000382723 COA4Q9NYJ1 87 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 TRAV3A0A0B4J244 114 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 TMEM177Q53S58 311 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 INO80EQ8NBZ0 244 aaPredicted RBP21.65■■□□□ 1.06
MSX1-201ENST00000382723 OR4C13Q8NGP0 309 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 OSR1Q8TAX0 266 aaPredicted RBP21.65■■□□□ 1.06
MSX1-201ENST00000382723 C7orf69Q9H7B7 122 aa21.65■■□□□ 1.06
MSX1-201ENST00000382723 IGHV3OR16-10A0A075B7F0 116 aa21.64■■□□□ 1.05
MSX1-201ENST00000382723 TRAV20A0A0B4J274 112 aa21.64■■□□□ 1.05
MSX1-201ENST00000382723 CENPVL3A0A0U1RRI6 287 aa21.64■■□□□ 1.05
MSX1-201ENST00000382723 WRBO00258 174 aa21.64■■□□□ 1.05
MSX1-201ENST00000382723 TIMM23O14925 209 aa21.64■■□□□ 1.05
MSX1-201ENST00000382723 WNK2Q9Y3S1 2297 aa21.64■■□□□ 1.05
MSX1-201ENST00000382723 MINOS1Q5TGZ0 78 aa21.63■■□□□ 1.05
MSX1-201ENST00000382723 OR4A16Q8NH70 328 aa21.63■■□□□ 1.05
MSX1-201ENST00000382723 RITA1Q96K30 269 aa21.63■■□□□ 1.05
MSX1-201ENST00000382723 MINOS1-NBL1R4GNA1 71 aa21.63■■□□□ 1.05
MSX1-201ENST00000382723 TSC22D2O75157 780 aa21.63■■□□□ 1.05
MSX1-201ENST00000382723 DYNAPQ8N1N2 210 aa21.63■■□□□ 1.05
MSX1-201ENST00000382723 MS4A7Q9GZW8 240 aaPredicted RBP21.63■■□□□ 1.05
MSX1-201ENST00000382723 UNC79Q9P2D8 2635 aa21.63■■□□□ 1.05
MSX1-201ENST00000382723 RNF222A6NCQ9 220 aa21.62■■□□□ 1.05
MSX1-201ENST00000382723 E5RGE8 158 aa21.62■■□□□ 1.05
MSX1-201ENST00000382723 CHST1O43916 411 aa21.62■■□□□ 1.05
MSX1-201ENST00000382723 SAA4P35542 130 aa21.62■■□□□ 1.05
MSX1-201ENST00000382723 WFDC11Q8NEX6 87 aa21.62■■□□□ 1.05
MSX1-201ENST00000382723 QTRT1Q9BXR0 403 aaKnown RBP21.62■■□□□ 1.05
MSX1-201ENST00000382723 SAA1P0DJI8 122 aaPredicted RBP21.61■■□□□ 1.05
MSX1-201ENST00000382723 POU2AF1Q16633 256 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 ACOT7LQ6ZUV0 252 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 TMUB2Q71RG4 321 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 OR8H3Q8N146 312 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 AIFM2Q9BRQ8 373 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 TBL2Q9Y4P3 447 aaKnown RBP21.61■■□□□ 1.05
MSX1-201ENST00000382723 HECTD1Q9ULT8 2610 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 MSGN1A6NI15 193 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 FAM90A9PA6NNJ1 464 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 NPFFO15130 113 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 TGFAP01135 160 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 NUP62P37198 522 aaPredicted RBP21.61■■□□□ 1.05
MSX1-201ENST00000382723 RELBQ01201 579 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 ARL6Q9H0F7 186 aa21.61■■□□□ 1.05
MSX1-201ENST00000382723 SVEP1Q4LDE5 3571 aa21.6■■□□□ 1.05
MSX1-201ENST00000382723 TRAV40A0A0B4J280 105 aa21.6■■□□□ 1.05
MSX1-201ENST00000382723 PVALBP20472 110 aaPredicted RBP21.6■■□□□ 1.05
MSX1-201ENST00000382723 VAMP2P63027 116 aa21.6■■□□□ 1.05
MSX1-201ENST00000382723 TNFRSF9Q07011 255 aa21.6■■□□□ 1.05
MSX1-201ENST00000382723 TMEM249Q2WGJ8 235 aa21.6■■□□□ 1.05
MSX1-201ENST00000382723 SYNGR2O43760 224 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 ATP6V1G1O75348 118 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 SNAPC5O75971 98 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 IGHV4-31P0DP07 118 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 IAPPP10997 89 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 SPINK9Q5DT21 86 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 RUSC1-AS1Q66K80 236 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 PIP4P2Q8N4L2 257 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 HSPB7Q9UBY9 170 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 OR2F2O95006 317 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 GATA3P23771 443 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 CD24P25063 80 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 OR2F1Q13607 317 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 CCDC144NLQ6NUI1 221 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 CFHR4Q92496 578 aa21.59■■□□□ 1.05
MSX1-201ENST00000382723 RBKSQ9H477 322 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms