RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 ZNF833PQ6ZTB9 187 aa13.76□□□□□ -0.21
HLA-A-202ENST00000376806 TREM1Q9NP99 234 aa13.76□□□□□ -0.21
HLA-A-202ENST00000376806 FAM96BQ9Y3D0 163 aa13.76□□□□□ -0.21
HLA-A-202ENST00000376806 FLNCQ14315 2725 aa13.75□□□□□ -0.21
HLA-A-202ENST00000376806 TRBV23-1A0A0A0MS06 115 aa13.75□□□□□ -0.21
HLA-A-202ENST00000376806 AGPAT2O15120 278 aa13.75□□□□□ -0.21
HLA-A-202ENST00000376806 CT45A6P0DMU7 189 aa13.75□□□□□ -0.21
HLA-A-202ENST00000376806 CT45A5P0DMU8 189 aa13.75□□□□□ -0.21
HLA-A-202ENST00000376806 CT45A7P0DMV0 189 aa13.75□□□□□ -0.21
HLA-A-202ENST00000376806 ITLN2Q8WWU7 325 aaPredicted RBP13.75□□□□□ -0.21
HLA-A-202ENST00000376806 PARD6GQ9BYG4 376 aaPredicted RBP13.75□□□□□ -0.21
HLA-A-202ENST00000376806 MS4A7Q9GZW8 240 aaPredicted RBP13.75□□□□□ -0.21
HLA-A-202ENST00000376806 RAB1BQ9H0U4 201 aa13.75□□□□□ -0.21
HLA-A-202ENST00000376806 TRAV3A0A0B4J244 114 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 ADCYAP1P18509 176 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 SPCS3P61009 180 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 THNSL2Q86YJ6 484 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 COMMD1Q8N668 190 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 SCGB1C1Q8TD33 95 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 ABCA4P78363 2273 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 PMS2P5A8MQ11 134 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 IFNA17P01571 189 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 POU2AF1Q16633 256 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 RTL8BQ17RB0 113 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 LRRC75BQ2VPJ9 315 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 PDLIM3Q53GG5 364 aaPredicted RBP13.74□□□□□ -0.21
HLA-A-202ENST00000376806 AKR1C8PQ5T2L2 129 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 OR4A47Q6IF82 309 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 C8orf31Q8N9H6 132 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 ZNF596Q8TC21 504 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 RHOVQ96L33 236 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 SLC35D1Q9NTN3 355 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 UQCC1Q9NVA1 299 aa13.74□□□□□ -0.21
HLA-A-202ENST00000376806 MYO18BQ8IUG5 2567 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 UBE2L5PA0A1B0GUS4 154 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 C15orf61A6NNL5 157 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 LY86O95711 162 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 OR8U8P0C7N1 319 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 SNCAP37840 140 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 AVPI1Q5T686 147 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 DHRS7BQ6IAN0 325 aaPredicted RBP13.73□□□□□ -0.21
HLA-A-202ENST00000376806 LINC00311Q8N616 119 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 PSMG3Q9BT73 122 aaPredicted RBP13.73□□□□□ -0.21
HLA-A-202ENST00000376806 RSG1Q9BU20 258 aa13.73□□□□□ -0.21
HLA-A-202ENST00000376806 MRPL20Q9BYC9 149 aaKnown RBP13.73□□□□□ -0.21
HLA-A-202ENST00000376806 WDR61Q9GZS3 305 aaKnown RBP13.73□□□□□ -0.21
HLA-A-202ENST00000376806 HRNRQ86YZ3 2850 aaPredicted RBP13.72□□□□□ -0.21
HLA-A-202ENST00000376806 A0A087X0M5 115 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 A0A1B0GX30 115 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 RNASEK-C17orf49H0YIS7 233 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 J3QR06 171 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 HRASP01112 189 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 ARG1P05089 322 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 CD5P06127 495 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 SOD3P08294 240 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 AGAP20933 346 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 FAM71F2Q6NXP2 309 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 ZNF841Q6ZN19 808 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 ZNF429Q86V71 674 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 TMEM147Q9BVK8 224 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 FBXO7Q9Y3I1 522 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 C15orf62A8K5M9 175 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 IGHV1-8P0DP01 117 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 DVL1P1P54792 670 aaPredicted RBP13.72□□□□□ -0.21
HLA-A-202ENST00000376806 ATP6V1FQ16864 119 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 DPPA3Q6W0C5 159 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 OR13D1Q8NGV5 346 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 OR10X1Q8NGY0 326 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 PINX1Q96BK5 328 aaKnown RBP13.72□□□□□ -0.21
HLA-A-202ENST00000376806 CLCC1Q96S66 551 aa13.72□□□□□ -0.21
HLA-A-202ENST00000376806 FOXA2Q9Y261 457 aaPredicted RBP13.72□□□□□ -0.21
HLA-A-202ENST00000376806 LY6HO94772 140 aa13.71□□□□□ -0.21
HLA-A-202ENST00000376806 SCAF4O95104 1147 aaKnown RBP13.71□□□□□ -0.21
HLA-A-202ENST00000376806 DEFA5Q01523 94 aa13.71□□□□□ -0.21
HLA-A-202ENST00000376806 C10orf91Q5T1B1 145 aa13.71□□□□□ -0.21
HLA-A-202ENST00000376806 DTX2Q86UW9 622 aa13.71□□□□□ -0.21
HLA-A-202ENST00000376806 LFNGQ8NES3 379 aa13.71□□□□□ -0.21
HLA-A-202ENST00000376806 OR10P1Q8NGE3 313 aa13.71□□□□□ -0.21
HLA-A-202ENST00000376806 TCF19Q9Y242 345 aa13.71□□□□□ -0.21
HLA-A-202ENST00000376806 CARHSP1Q9Y2V2 147 aaKnown RBP13.71□□□□□ -0.21
HLA-A-202ENST00000376806 F8W036 122 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 APOA2P02652 100 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 IGKV1-16P04430 117 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 VDAC2P45880 294 aaPredicted RBP13.7□□□□□ -0.22
HLA-A-202ENST00000376806 RPS16P62249 146 aaKnown RBP13.7□□□□□ -0.22
HLA-A-202ENST00000376806 C11orf42Q8N5U0 333 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 OR9G1Q8NH87 305 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 NEU4Q8WWR8 484 aaPredicted RBP13.7□□□□□ -0.22
HLA-A-202ENST00000376806 TAF15Q92804 592 aaKnown RBP eCLIP13.7□□□□□ -0.22
HLA-A-202ENST00000376806 RBMXL1Q96E39 390 aaKnown RBP13.7□□□□□ -0.22
HLA-A-202ENST00000376806 SCRT1Q9BWW7 348 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 TMEM14BQ9NUH8 114 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 COL12A1Q99715 3063 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 A0A1B0GV50 99 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 A0A1W2PPR1 153 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 SFTA3P0C7M3 94 aa13.7□□□□□ -0.22
HLA-A-202ENST00000376806 HOXA1P49639 335 aaPredicted RBP13.7□□□□□ -0.22
HLA-A-202ENST00000376806 GUK1Q16774 197 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms