RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SPCS3P61009 180 aa14.73□□□□□ -0.05
HLA-DQB1-201ENST00000374943 SLC38A11Q08AI6 406 aa14.73□□□□□ -0.05
HLA-DQB1-201ENST00000374943 DTX2Q86UW9 622 aa14.73□□□□□ -0.05
HLA-DQB1-201ENST00000374943 OR4A16Q8NH70 328 aa14.73□□□□□ -0.05
HLA-DQB1-201ENST00000374943 ZDHHC16Q969W1 377 aa14.73□□□□□ -0.05
HLA-DQB1-201ENST00000374943 HRNRQ86YZ3 2850 aaPredicted RBP14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 PMS2P5A8MQ11 134 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 CEBPZOSA8MTT3 80 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 LYNX1G3V0Z9 82 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 LYNX1P0DP58 116 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 UQCRFS1P47985 274 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 RUNX1Q01196 453 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 TAGLNQ01995 201 aaKnown RBP14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 ATP6V1FQ16864 119 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 DPPA3Q6W0C5 159 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 LILRB2Q8N423 598 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 ZNF843Q8N446 348 aa14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 NEU4Q8WWR8 484 aaPredicted RBP14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 PSMG3Q9BT73 122 aaPredicted RBP14.72□□□□□ -0.05
HLA-DQB1-201ENST00000374943 TSPAN15O95858 294 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 HRASP01112 189 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 ARG1P05089 322 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 GNLYP22749 145 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 FHITP49789 147 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 OR2B8PP59922 312 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 ERVFRD-1P60508 538 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 SRSF3P84103 164 aaKnown RBP14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 ZNF616Q08AN1 781 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 RTL8BQ17RB0 113 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 LRRC75BQ2VPJ9 315 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 C10orf91Q5T1B1 145 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 ZNF841Q6ZN19 808 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 SSX9Q7RTT3 188 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 SCGB1C1Q8TD33 95 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 NARS2Q96I59 477 aaKnown RBP14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 RHOVQ96L33 236 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 HIPK2Q9H2X6 1198 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 RELNP78509 3460 aa14.71□□□□□ -0.05
HLA-DQB1-201ENST00000374943 C15orf61A6NNL5 157 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 CD5P06127 495 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 ZNF137PP52743 207 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SLC25A24Q6NUK1 477 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 VKORC1L1Q8N0U8 176 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 PUSL1Q8N0Z8 303 aaKnown RBP14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 LFNGQ8NES3 379 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 FAM213BQ8TBF2 198 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 PINX1Q96BK5 328 aaKnown RBP14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SLC35D1Q9NTN3 355 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 FOXA2Q9Y261 457 aaPredicted RBP14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 RFNGQ9Y644 331 aa14.71□□□□□ -0.06
HLA-DQB1-201ENST00000374943 J3QR06 171 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 IFNA17P01571 189 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 IL6RP08887 468 aaPredicted RBP14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 IGHV1-8P0DP01 117 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SNCAP37840 140 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR4A47Q6IF82 309 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 THNSL2Q86YJ6 484 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 C11orf42Q8N5U0 333 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TMEM186Q96B77 213 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 WDR61Q9GZS3 305 aaKnown RBP14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 UQCC1Q9NVA1 299 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 ZNRD1Q9P1U0 126 aa14.7□□□□□ -0.06
HLA-DQB1-201ENST00000374943 ASH1LQ9NR48 2969 aaKnown RBP14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SCO1O75880 301 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 RBP4P02753 201 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SOD3P08294 240 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 VDAC2P45880 294 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 DVL1P1P54792 670 aaPredicted RBP14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 GNB2P62879 340 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 AKR1C1Q04828 323 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 VWC2Q2TAL6 325 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 AKR1C8PQ5T2L2 129 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR9G1Q8NH87 305 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 C8orf46Q8TAG6 207 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 AIFM2Q9BRQ8 373 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TMEM147Q9BVK8 224 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TREM1Q9NP99 234 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TMEM14BQ9NUH8 114 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 CARHSP1Q9Y2V2 147 aaKnown RBP14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TIMM9Q9Y5J7 89 aa14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 FLNBO75369 2602 aaKnown RBP14.69□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TRAV3A0A0B4J244 114 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 C15orf62A8K5M9 175 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 RNASEK-C17orf49H0YIS7 233 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 APOC3P02656 99 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 ADCYAP1P18509 176 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 RPP30P78346 268 aaKnown RBP14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR8G2PQ6IF36 304 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR10P1Q8NGE3 313 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR5AN1Q8NGI8 311 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR13D1Q8NGV5 346 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TNFRSF14Q92956 283 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 ST6GALNAC6Q969X2 333 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 CLCC1Q96S66 551 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 MRPL20Q9BYC9 149 aaKnown RBP14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 MIOXQ9UGB7 285 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 MALRD1Q5VYJ5 2156 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 A0A1B0GW64 132 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 BTBD17A6NE02 478 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 APOA2P02652 100 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms